Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
UPF3BQ9BZI7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 RNA5SP31-201ENST00000411144 127 ntBASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 RPS12P23-201ENST00000419579 400 ntBASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 AL035458.1-201ENST00000433096 585 ntBASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 OR6C72P-201ENST00000451403 892 ntBASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 RBMY2UP-201ENST00000453474 324 ntBASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 MRPL35P4-201ENST00000453682 566 ntBASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 CEACAMP4-201ENST00000457676 421 ntBASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 RPL23AP67-201ENST00000465341 474 ntBASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 RNU4-18P-201ENST00000516751 149 ntBASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 IGKV2-26-201ENST00000518305 343 ntBASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 AP001636.2-201ENST00000525517 696 ntBASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 MIR3186-201ENST00000577404 85 ntBASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 BMS1P7-201ENST00000602440 1052 ntBASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 AC079880.2-201ENST00000603790 1213 ntBASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 MIR8058-201ENST00000615737 89 ntBASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 DDX6P1-205ENST00000441966 1436 ntBASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.01□□□□□ -1.77
UPF3BQ9BZI7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
UPF3BQ9BZI7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
UPF3BQ9BZI7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4□□□□□ -1.77
UPF3BQ9BZI7 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4□□□□□ -1.77
UPF3BQ9BZI7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4□□□□□ -1.77
UPF3BQ9BZI7 RN7SKP222-201ENST00000410651 315 ntBASIC4□□□□□ -1.77
UPF3BQ9BZI7 RPS7P13-201ENST00000413955 498 ntBASIC4□□□□□ -1.77
UPF3BQ9BZI7 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4□□□□□ -1.77
UPF3BQ9BZI7 MTCO1P45-201ENST00000431457 267 ntBASIC4□□□□□ -1.77
UPF3BQ9BZI7 CCRL1P1-201ENST00000449542 1053 ntBASIC4□□□□□ -1.77
UPF3BQ9BZI7 RPL26P28-201ENST00000451325 435 ntBASIC4□□□□□ -1.77
UPF3BQ9BZI7 AC006539.3-201ENST00000454258 129 ntBASIC4□□□□□ -1.77
UPF3BQ9BZI7 RPL7P48-201ENST00000461513 746 ntBASIC4□□□□□ -1.77
UPF3BQ9BZI7 AC021205.1-201ENST00000468797 348 ntBASIC4□□□□□ -1.77
UPF3BQ9BZI7 CYCSP20-201ENST00000473154 315 ntBASIC4□□□□□ -1.77
UPF3BQ9BZI7 OR4R3P-201ENST00000525084 838 ntBASIC4□□□□□ -1.77
UPF3BQ9BZI7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4□□□□□ -1.77
UPF3BQ9BZI7 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4□□□□□ -1.77
UPF3BQ9BZI7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4□□□□□ -1.77
UPF3BQ9BZI7 AC011611.1-201ENST00000552179 197 ntBASIC4□□□□□ -1.77
UPF3BQ9BZI7 AL161713.1-201ENST00000555538 145 ntBASIC4□□□□□ -1.77
UPF3BQ9BZI7 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4□□□□□ -1.77
UPF3BQ9BZI7 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4□□□□□ -1.77
UPF3BQ9BZI7 AC012213.4-201ENST00000606457 354 ntBASIC4□□□□□ -1.77
UPF3BQ9BZI7 AC092159.4-201ENST00000624944 550 ntBASIC4□□□□□ -1.77
UPF3BQ9BZI7 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4□□□□□ -1.77
UPF3BQ9BZI7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
UPF3BQ9BZI7 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4□□□□□ -1.77
UPF3BQ9BZI7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
UPF3BQ9BZI7 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
UPF3BQ9BZI7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
UPF3BQ9BZI7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 AC025125.1-201ENST00000624743 1922 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 AC007496.3-201ENST00000624987 3443 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 TAF9BP1-201ENST00000396646 746 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 LIPT1P1-201ENST00000415870 1186 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 BX842559.1-201ENST00000419615 532 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 RPL7P44-201ENST00000424827 742 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 NPM1P24-201ENST00000428039 894 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 AL512649.1-201ENST00000428997 581 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 AC245517.2-201ENST00000442890 346 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 AC115115.1-201ENST00000449927 248 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 HMGN1P18-201ENST00000457642 277 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 RPL21P10-201ENST00000463521 490 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 RPL9P32-201ENST00000464118 620 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 RPL23AP14-201ENST00000468281 468 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 RN7SL330P-201ENST00000469709 307 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 AC087312.1-201ENST00000471411 480 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 RPL7P23-201ENST00000493874 747 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 AC112198.1-201ENST00000505369 1220 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.99□□□□□ -1.77
UPF3BQ9BZI7 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms