Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL133481.2-203ENST00000607558 139 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AC103710.3-201ENST00000608157 948 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AL354950.2-201ENST00000617939 290 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AC004076.2-201ENST00000620532 3323 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 NUP58P1-201ENST00000502546 1738 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 OR4G1P-203ENST00000641984 1631 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 RIOK3P1-201ENST00000418778 1528 ntBASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SSBP3Q9BWW4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC011155.1-201ENST00000316512 456 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC073343.1-201ENST00000328239 651 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 Y_RNA.46-201ENST00000362695 102 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 RNU6-1309P-201ENST00000363305 108 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 RNY1P12-201ENST00000364251 105 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 RNU6-1297P-201ENST00000384415 104 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 RNU6-1151P-201ENST00000384684 107 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AL136116.1-201ENST00000403591 381 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 BTBD10P2-201ENST00000404779 676 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 OR3A2-201ENST00000408891 1076 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 NDUFB4P5-201ENST00000415445 361 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC007394.1-201ENST00000421941 531 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AL358176.2-201ENST00000425769 204 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 RSU1P2-202ENST00000437884 485 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 ARL2BPP10-201ENST00000446487 531 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 RPS23P9-201ENST00000448848 438 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 GAPDHP14-201ENST00000450472 937 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 RNU7-136P-201ENST00000458819 69 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 RNU7-63P-201ENST00000459054 62 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC090602.1-201ENST00000469695 252 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 TMEM248P1-201ENST00000510579 951 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 RN7SKP283-201ENST00000517197 270 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 RN7SKP256-201ENST00000517201 314 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 COX6B1P6-201ENST00000522347 255 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 BNIP3P6-201ENST00000549284 499 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 DUX4L52-201ENST00000549363 777 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC004817.2-201ENST00000561794 651 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC007225.2-201ENST00000562529 256 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 FRG2DP-202ENST00000566967 323 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 RPL26P30-202ENST00000602923 645 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 BX664608.1-201ENST00000610519 487 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC084781.2-201ENST00000615568 161 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC009237.17-201ENST00000618111 748 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC009318.4-201ENST00000620496 486 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 AC092447.10-201ENST00000620607 1652 ntBASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SSBP3Q9BWW4 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms