Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX3Q99909 DPRXP1-201ENST00000426312 460 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 RPL21P66-201ENST00000426566 466 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 Z93242.1-201ENST00000427102 353 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 VDAC1P6-201ENST00000430062 855 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX3Q99909 VDAC1P3-201ENST00000434069 851 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 AC073143.1-201ENST00000436316 395 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 ELOCP8-201ENST00000439309 332 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.66□□□□□ -1.82
SSX3Q99909 AL662791.1-201ENST00000441992 928 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 ELOCP15-201ENST00000442090 332 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 HMGB3P6-201ENST00000444896 598 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 COX6CP18-201ENST00000448769 222 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX3Q99909 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX3Q99909 RNU7-170P-201ENST00000459303 61 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 VN1R17P-201ENST00000472048 1090 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 VPS26AP1-201ENST00000483197 979 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 SCARNA1-201ENST00000517138 166 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 IGLVIV-65-201ENST00000517313 360 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 AP001207.2-201ENST00000519490 539 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX3Q99909 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.66□□□□□ -1.82
SSX3Q99909 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX3Q99909 AP003385.6-201ENST00000531603 374 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 AC006518.1-201ENST00000541449 943 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX3Q99909 MIR4509-3-201ENST00000578671 94 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 MIR4509-2-201ENST00000583920 94 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 AL669831.4-202ENST00000590817 238 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 AC011468.4-201ENST00000603942 409 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 AC011458.1-201ENST00000604034 617 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.66□□□□□ -1.82
SSX3Q99909 AL365400.2-201ENST00000605604 902 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 AC103710.3-201ENST00000608157 948 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 AC090116.1-201ENST00000615679 446 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 MIR4509-1-201ENST00000618224 94 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 AC068722.2-201ENST00000618734 544 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 MIR6758-201ENST00000620653 63 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSX3Q99909 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSX3Q99909 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSX3Q99909 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
SSX3Q99909 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSX3Q99909 OTUD4P1-201ENST00000237841 3067 ntBASIC3.66□□□□□ -1.82
SSX3Q99909 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.66□□□□□ -1.82
SSX3Q99909 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSX3Q99909 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
SSX3Q99909 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
SSX3Q99909 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
SSX3Q99909 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.65□□□□□ -1.82
SSX3Q99909 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
SSX3Q99909 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
SSX3Q99909 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
SSX3Q99909 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.65□□□□□ -1.82
SSX3Q99909 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.65□□□□□ -1.82
SSX3Q99909 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SSX3Q99909 AC067945.1-201ENST00000342609 618 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 RPL32P3-201ENST00000359025 275 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 RNU6-1066P-201ENST00000363573 105 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 RNA5SP322-201ENST00000363617 119 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 RNU4-51P-201ENST00000364206 140 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 SNORD6-201ENST00000365444 73 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
SSX3Q99909 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
SSX3Q99909 RNU6-837P-201ENST00000391056 108 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 AL583834.1-201ENST00000406943 343 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 RNA5SP56-201ENST00000410277 118 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 ELOCP19-201ENST00000411919 318 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 AL136133.1-201ENST00000413694 376 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 RPF2P1-201ENST00000424137 906 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 HIGD1AP12-201ENST00000427832 281 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX3Q99909 AC011998.1-201ENST00000433403 117 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 HLA-N-201ENST00000437516 135 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 CYCSP43-201ENST00000438233 310 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 ELOCP13-201ENST00000443934 329 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SSX3Q99909 snoU13.3-201ENST00000459441 104 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 RPL5P24-201ENST00000463742 885 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 RPL7L1P8-201ENST00000469911 741 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX3Q99909 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX3Q99909 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.65□□□□□ -1.83
SSX3Q99909 ARL2BPP5-201ENST00000523141 481 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.65□□□□□ -1.83
SSX3Q99909 AP001317.1-201ENST00000531194 960 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SSX3Q99909 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX3Q99909 MTCYBP23-201ENST00000558717 1102 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.65□□□□□ -1.83
SSX3Q99909 SNORD39.3-201ENST00000584451 71 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 GAS5-AS1-201ENST00000602767 694 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 AC012409.3-201ENST00000611343 981 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 AC022960.3-201ENST00000619794 441 ntBASIC3.65□□□□□ -1.83
SSX3Q99909 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.65□□□□□ -1.83
SSX3Q99909 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
SSX3Q99909 MIR6810-201ENST00000622701 70 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms