Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 METTL15P1-201ENST00000481421 1045 ntBASIC4.03□□□□□ -1.76
ABCA3Q99758 AC114781.4-201ENST00000513707 639 ntBASIC4.03□□□□□ -1.76
ABCA3Q99758 RNU4-29P-201ENST00000515943 174 ntBASIC4.03□□□□□ -1.76
ABCA3Q99758 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.03□□□□□ -1.76
ABCA3Q99758 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.03□□□□□ -1.76
ABCA3Q99758 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.03□□□□□ -1.76
ABCA3Q99758 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
ABCA3Q99758 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
ABCA3Q99758 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
ABCA3Q99758 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ABCA3Q99758 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.02□□□□□ -1.77
ABCA3Q99758 SNORD15B-201ENST00000384714 146 ntBASIC4.02□□□□□ -1.77
ABCA3Q99758 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
ABCA3Q99758 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ABCA3Q99758 NIPA2P5-201ENST00000452282 464 ntBASIC4.02□□□□□ -1.77
ABCA3Q99758 AC083906.5-201ENST00000503722 328 ntBASIC4.02□□□□□ -1.77
ABCA3Q99758 AL590808.1-201ENST00000618696 141 ntBASIC4.02□□□□□ -1.77
ABCA3Q99758 MIR7843-201ENST00000622274 79 ntBASIC4.02□□□□□ -1.77
ABCA3Q99758 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.02□□□□□ -1.77
ABCA3Q99758 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.02□□□□□ -1.77
ABCA3Q99758 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ABCA3Q99758 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.02□□□□□ -1.77
ABCA3Q99758 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
ABCA3Q99758 MIR30E-201ENST00000362104 92 ntBASIC4.01□□□□□ -1.77
ABCA3Q99758 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ABCA3Q99758 RSL24D1P4-201ENST00000400938 484 ntBASIC4.01□□□□□ -1.77
ABCA3Q99758 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.01□□□□□ -1.77
ABCA3Q99758 TOMM20P4-201ENST00000427861 435 ntBASIC4.01□□□□□ -1.77
ABCA3Q99758 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.01□□□□□ -1.77
ABCA3Q99758 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.01□□□□□ -1.77
ABCA3Q99758 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.01□□□□□ -1.77
ABCA3Q99758 SNORA70.19-201ENST00000516717 90 ntBASIC4.01□□□□□ -1.77
ABCA3Q99758 OR5G4P-201ENST00000525251 760 ntBASIC4.01□□□□□ -1.77
ABCA3Q99758 AL049874.4-201ENST00000557593 255 ntBASIC4.01□□□□□ -1.77
ABCA3Q99758 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.01□□□□□ -1.77
ABCA3Q99758 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.01□□□□□ -1.77
ABCA3Q99758 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.01□□□□□ -1.77
ABCA3Q99758 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ABCA3Q99758 AP002088.1-201ENST00000382740 395 ntBASIC4.01□□□□□ -1.77
ABCA3Q99758 RNU2-52P-201ENST00000410680 190 ntBASIC4.01□□□□□ -1.77
ABCA3Q99758 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.01□□□□□ -1.77
ABCA3Q99758 AC073508.1-201ENST00000428866 656 ntBASIC4.01□□□□□ -1.77
ABCA3Q99758 DNAJC19P1-201ENST00000455312 319 ntBASIC4.01□□□□□ -1.77
ABCA3Q99758 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.01□□□□□ -1.77
ABCA3Q99758 SYT14P1-201ENST00000481459 721 ntBASIC4.01□□□□□ -1.77
ABCA3Q99758 RPL31P13-201ENST00000484151 370 ntBASIC4.01□□□□□ -1.77
ABCA3Q99758 Y_RNA.676-201ENST00000516393 96 ntBASIC4.01□□□□□ -1.77
ABCA3Q99758 AP002812.4-201ENST00000532139 286 ntBASIC4.01□□□□□ -1.77
ABCA3Q99758 AC009097.3-201ENST00000563557 1018 ntBASIC4.01□□□□□ -1.77
ABCA3Q99758 CYP2C60P-201ENST00000566088 139 ntBASIC4.01□□□□□ -1.77
ABCA3Q99758 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.01□□□□□ -1.77
ABCA3Q99758 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ABCA3Q99758 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ABCA3Q99758 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4□□□□□ -1.77
ABCA3Q99758 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4□□□□□ -1.77
ABCA3Q99758 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
ABCA3Q99758 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
ABCA3Q99758 RNU6-304P-201ENST00000364855 107 ntBASIC4□□□□□ -1.77
ABCA3Q99758 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
ABCA3Q99758 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4□□□□□ -1.77
ABCA3Q99758 AL139039.1-201ENST00000401900 692 ntBASIC4□□□□□ -1.77
ABCA3Q99758 NPM1P11-201ENST00000417106 855 ntBASIC4□□□□□ -1.77
ABCA3Q99758 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ABCA3Q99758 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4□□□□□ -1.77
ABCA3Q99758 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4□□□□□ -1.77
ABCA3Q99758 RPS20P32-201ENST00000456044 356 ntBASIC4□□□□□ -1.77
ABCA3Q99758 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4□□□□□ -1.77
ABCA3Q99758 AP001207.2-201ENST00000519490 539 ntBASIC4□□□□□ -1.77
ABCA3Q99758 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4□□□□□ -1.77
ABCA3Q99758 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4□□□□□ -1.77
ABCA3Q99758 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4□□□□□ -1.77
ABCA3Q99758 ASNSP3-201ENST00000451989 1306 ntBASIC4□□□□□ -1.77
ABCA3Q99758 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ABCA3Q99758 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
ABCA3Q99758 AC017002.4-201ENST00000604721 1525 ntBASIC3.99□□□□□ -1.77
ABCA3Q99758 AL672167.1-206ENST00000356293 943 ntBASIC3.99□□□□□ -1.77
ABCA3Q99758 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.99□□□□□ -1.77
ABCA3Q99758 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
ABCA3Q99758 MYL8P-204ENST00000431574 518 ntBASIC3.99□□□□□ -1.77
ABCA3Q99758 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.99□□□□□ -1.77
ABCA3Q99758 RAB28P3-201ENST00000448325 597 ntBASIC3.99□□□□□ -1.77
ABCA3Q99758 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.99□□□□□ -1.77
ABCA3Q99758 AC010307.1-201ENST00000467206 836 ntBASIC3.99□□□□□ -1.77
ABCA3Q99758 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.99□□□□□ -1.77
ABCA3Q99758 AL137072.1-201ENST00000603444 466 ntBASIC3.99□□□□□ -1.77
ABCA3Q99758 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.99□□□□□ -1.77
ABCA3Q99758 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
ABCA3Q99758 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ABCA3Q99758 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
ABCA3Q99758 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
ABCA3Q99758 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.98□□□□□ -1.77
ABCA3Q99758 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.98□□□□□ -1.77
ABCA3Q99758 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.98□□□□□ -1.77
ABCA3Q99758 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ABCA3Q99758 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.98□□□□□ -1.77
ABCA3Q99758 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.98□□□□□ -1.77
ABCA3Q99758 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.98□□□□□ -1.77
ABCA3Q99758 AL365400.2-201ENST00000605604 902 ntBASIC3.98□□□□□ -1.77
ABCA3Q99758 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.98□□□□□ -1.77
ABCA3Q99758 AC022509.4-201ENST00000621404 572 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms