Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 RPL5P22-201ENST00000480199 884 ntBASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 AC008758.3-201ENST00000507003 1829 ntBASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 AC006499.2-201ENST00000513470 337 ntBASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 BGLT3-201ENST00000564523 994 ntBASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 AC097461.1-201ENST00000568928 2821 ntBASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 AC091488.1-201ENST00000604239 660 ntBASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 AP001521.1-201ENST00000609150 300 ntBASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 AC017083.3-201ENST00000609955 700 ntBASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHAMP1Q96JM3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 OR4G11P-202ENST00000642116 1414 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 ZNF652P1-201ENST00000442420 1309 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 PCAT14-202ENST00000627127 3935 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 HMGB3P23-201ENST00000414981 585 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AIMP1P1-201ENST00000418670 937 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AC009480.2-201ENST00000422916 432 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 RPL7P57-201ENST00000423238 740 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 GLRXP1-201ENST00000423261 334 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AL356583.2-201ENST00000426536 280 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AL360081.1-201ENST00000428299 555 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AC016712.1-201ENST00000431088 378 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AC004938.1-201ENST00000438468 308 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AL031584.1-201ENST00000447169 754 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 RPL23AP56-201ENST00000460778 453 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 RNU6-314P-201ENST00000516574 104 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 PAICSP4-201ENST00000517543 1253 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 OR6C73P-201ENST00000546432 358 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 PARP1P2-201ENST00000556806 195 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AC141257.3-201ENST00000572906 215 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 MIR3913-1-201ENST00000577744 102 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 MIR5697-201ENST00000578045 78 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 MIR4433B-201ENST00000581329 102 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AL359314.1-201ENST00000616913 261 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 CR381653.2-201ENST00000624041 768 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 AP001273.1-201ENST00000624493 3152 ntBASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
CHAMP1Q96JM3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AC022031.1-201ENST00000585985 2593 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 SNURFL-201ENST00000309296 343 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 RNU6-694P-201ENST00000364071 147 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 Y_RNA.256-201ENST00000364594 104 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 MIR192-201ENST00000384915 110 ntBASIC5.59□□□□□ -1.51
CHAMP1Q96JM3 AL109941.1-201ENST00000401925 229 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms