Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AL513302.2-201ENST00000562313 1842 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 LINC00561-201ENST00000565815 2738 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC234772.1-201ENST00000377927 937 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 MIR504-201ENST00000385065 83 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC093156.1-201ENST00000440382 670 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC009263.1-201ENST00000441193 1239 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 UBL5P3-201ENST00000475112 231 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 RN7SKP132-201ENST00000516001 208 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC092747.2-201ENST00000545069 983 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 TRAV15-201ENST00000556680 249 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 H3F3AP1-201ENST00000559984 334 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 MIR2682-201ENST00000580305 110 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC066616.2-201ENST00000559334 1481 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 MIR422A-201ENST00000362286 90 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 S100A11P2-201ENST00000467589 312 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 SYT14P1-201ENST00000481459 721 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 OR2A20P-203ENST00000498397 1268 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 PCBP2P3-201ENST00000509726 843 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AL139286.1-201ENST00000604465 483 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC022149.2-201ENST00000621061 203 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 MIR184-201ENST00000384962 84 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 ATP6V0E1P4-201ENST00000427294 242 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 RPL7P38-201ENST00000488396 739 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 RNU6-1334P-201ENST00000516032 105 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 SUMO2P20-201ENST00000520803 283 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 UBL5P2-201ENST00000583788 219 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 UBE3AP2-201ENST00000429033 2259 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 OR11H5P-202ENST00000641612 1325 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 RNU6-1320P-201ENST00000390838 107 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 RNU6-1269P-201ENST00000391139 107 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 UBA52P6-201ENST00000399822 382 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 RNU6-599P-201ENST00000459383 107 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 RNU6-1193P-201ENST00000459461 107 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC017037.1-201ENST00000508460 471 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 RNU6-991P-201ENST00000516168 107 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AL512310.1-201ENST00000548639 172 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AL365400.2-201ENST00000605604 902 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 RNU6-368P-201ENST00000620928 107 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 RNU6-538P-201ENST00000622329 107 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 RNA5SP235-201ENST00000365411 114 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 MYL8P-204ENST00000431574 518 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 TAF8-207ENST00000482432 556 ntTSL 2 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 PDCL2P2-201ENST00000533651 189 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC010809.3-201ENST00000621310 641 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC068647.1-201ENST00000489539 2265 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC107015.1-201ENST00000466902 747 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 SARNP-203ENST00000552080 726 ntTSL 2 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AL133457.1-201ENST00000564251 987 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 AC006557.5-201ENST00000603126 811 ntBASIC0.99□□□□□ -2.25
SYNE1Q8NF91 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC0.99□□□□□ -2.25
SYNE1Q8NF91 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AF117829.1-206ENST00000621883 3802 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 CUL4AP1-201ENST00000514750 1863 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AL009174.1-201ENST00000426577 416 ntBASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC0.98□□□□□ -2.25
SYNE1Q8NF91 AC135001.1-201ENST00000544546 283 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms