Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 HMGN2P7-201ENST00000456186 273 ntBASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 CEACAMP4-201ENST00000457676 421 ntBASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 AC104687.1-201ENST00000485829 412 ntBASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 AC078817.1-201ENST00000492623 435 ntBASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 IGKV2-36-201ENST00000519999 223 ntBASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 AC091515.1-201ENST00000548110 679 ntBASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 TRAV15-201ENST00000556680 249 ntBASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 AC025918.2-201ENST00000558683 763 ntBASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 AC037471.2-201ENST00000564941 598 ntBASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 ZNF92P3-201ENST00000596594 954 ntBASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 U6.48-201ENST00000618523 106 ntBASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 FRG1DP-201ENST00000635586 771 ntBASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 MIR4496-201ENST00000635896 61 ntBASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SHROOM1Q2M3G4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 AC119744.1-201ENST00000454746 1715 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 Y_RNA.110-201ENST00000363220 99 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 RNU1-33P-201ENST00000364249 162 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 RNA5SP189-201ENST00000364920 115 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 SNORD17-201ENST00000390930 237 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 PTGES3P2-201ENST00000407942 482 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 HMGB3P20-201ENST00000417997 600 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 OSTCP5-201ENST00000425293 453 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 RPL29P29-201ENST00000448725 423 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 SNORD105B-201ENST00000458770 79 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 DSTNP2-201ENST00000504533 515 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 MTND3P24-201ENST00000506306 329 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 PTGES3P3-201ENST00000511479 482 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 RNU2-58P-201ENST00000516403 183 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 SNORA31.13-201ENST00000516624 135 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 SUMO2P20-201ENST00000520803 283 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 POLR2KP1-201ENST00000553226 168 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 AC079148.1-201ENST00000565944 819 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 MRPS35P3-201ENST00000603189 709 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 MIR8058-201ENST00000615737 89 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 AC024023.1-201ENST00000624530 922 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 MTND5P1-201ENST00000445440 1375 ntBASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.22□□□□□ -1.73
SHROOM1Q2M3G4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.21□□□□□ -1.73
SHROOM1Q2M3G4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
SHROOM1Q2M3G4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.21□□□□□ -1.73
SHROOM1Q2M3G4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 RNA5SP50-201ENST00000363731 107 ntBASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 RNU4-74P-201ENST00000411280 161 ntBASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 AL121882.1-201ENST00000422893 417 ntBASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 SDCBPP2-201ENST00000424643 885 ntBASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 NANOGP6-201ENST00000429190 847 ntBASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 AC006480.1-201ENST00000449887 378 ntBASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 U3.44-201ENST00000458938 192 ntBASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 RPL23AP73-201ENST00000492507 471 ntBASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 AC026427.2-201ENST00000506228 536 ntBASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 AC005921.1-201ENST00000510589 286 ntBASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 SNORA70.14-201ENST00000516205 110 ntBASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 IGKV2D-23-201ENST00000518179 286 ntBASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 MIR4644-201ENST00000579929 84 ntBASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 AC006116.10-201ENST00000591836 581 ntBASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 AC005776.1-201ENST00000603164 290 ntBASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 AC079880.2-201ENST00000603790 1213 ntBASIC4.21□□□□□ -1.74
SHROOM1Q2M3G4 BRDTP1-201ENST00000605735 677 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms