Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 Z82205.1-201ENST00000428456 297 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 RBMY2QP-201ENST00000429799 1147 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 PTMAP6-201ENST00000439110 327 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX4Q06945 AL161722.1-201ENST00000446972 1032 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 GAPDHP14-201ENST00000450472 937 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX4Q06945 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX4Q06945 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX4Q06945 RPS15AP17-201ENST00000470598 390 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 BX284632.1-201ENST00000478218 541 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 RPL7P6-201ENST00000480903 738 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 AC027575.1-201ENST00000481064 460 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 RPL38P4-201ENST00000502376 214 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 TMEM251P1-201ENST00000503717 318 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 AC010587.1-201ENST00000505809 469 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX4Q06945 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX4Q06945 AC123904.2-201ENST00000548059 300 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.82□□□□□ -1.48
SOX4Q06945 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.82□□□□□ -1.48
SOX4Q06945 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SOX4Q06945 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.82□□□□□ -1.48
SOX4Q06945 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX4Q06945 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX4Q06945 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.82□□□□□ -1.48
SOX4Q06945 AC016925.2-201ENST00000605108 242 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 AC103710.3-201ENST00000608157 948 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 AC126915.2-201ENST00000610957 190 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 AL354950.2-201ENST00000617939 290 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.82□□□□□ -1.48
SOX4Q06945 AL442128.2-201ENST00000620246 1824 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SOX4Q06945 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SOX4Q06945 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX4Q06945 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SOX4Q06945 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX4Q06945 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX4Q06945 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SOX4Q06945 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SOX4Q06945 AC239868.2-201ENST00000564237 4527 ntBASIC5.82□□□□□ -1.48
SOX4Q06945 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SOX4Q06945 AL022323.4-201ENST00000623980 13120 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.81□□□□□ -1.48
SOX4Q06945 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.81□□□□□ -1.48
SOX4Q06945 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.81□□□□□ -1.48
SOX4Q06945 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SOX4Q06945 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SOX4Q06945 OR4G1P-203ENST00000641984 1631 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SOX4Q06945 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SOX4Q06945 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SOX4Q06945 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SOX4Q06945 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SOX4Q06945 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SOX4Q06945 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SOX4Q06945 AL591135.1-201ENST00000401578 5914 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 SNORA58B-201ENST00000364259 136 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 RNU6-574P-201ENST00000384265 107 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 AL136116.1-201ENST00000403591 381 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 AL591416.1-201ENST00000404015 867 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.81□□□□□ -1.48
SOX4Q06945 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.81□□□□□ -1.48
SOX4Q06945 NPM1P40-201ENST00000412758 733 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 AL807761.1-201ENST00000417622 171 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 MTCO2P27-201ENST00000420740 428 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.81□□□□□ -1.48
SOX4Q06945 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.81□□□□□ -1.48
SOX4Q06945 FAM103A2P-201ENST00000444122 354 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 LINC02210-201ENST00000444561 288 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.81□□□□□ -1.48
SOX4Q06945 CACYBPP2-201ENST00000453625 678 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 RPL37P3-201ENST00000456825 293 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 RPL31P50-201ENST00000471002 296 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.81□□□□□ -1.48
SOX4Q06945 AC233702.1-201ENST00000482905 502 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 RPS4XP18-201ENST00000495480 763 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 EIF4EP3-201ENST00000498782 656 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.81□□□□□ -1.48
SOX4Q06945 NPM1P41-201ENST00000512920 831 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 RNU6-714P-201ENST00000516963 103 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.81□□□□□ -1.48
SOX4Q06945 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.81□□□□□ -1.48
SOX4Q06945 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.81□□□□□ -1.48
SOX4Q06945 AC069307.1-201ENST00000602820 447 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 AC087763.1-201ENST00000603391 286 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 AC009597.2-201ENST00000604659 592 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 AC211433.2-201ENST00000608433 387 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 OR10AB1P-201ENST00000609613 938 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 AC015712.7-201ENST00000615211 635 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 AC007792.1-201ENST00000623023 402 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 AC040168.1-201ENST00000623594 991 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.81□□□□□ -1.48
SOX4Q06945 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SOX4Q06945 AC073869.8-201ENST00000641806 335 ntBASIC5.81□□□□□ -1.48
SOX4Q06945 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SOX4Q06945 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.81□□□□□ -1.48
SOX4Q06945 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
SOX4Q06945 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms