Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.13□□□□□ -1.59
RHBDL3P58872 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RHBDL3P58872 SPRR2C-201ENST00000290702 219 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDL3P58872 RNU1-20P-201ENST00000363314 162 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 SNORD82-201ENST00000365530 70 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 RPL32P23-201ENST00000397237 405 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 MTND4LP20-201ENST00000402379 270 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 PPIAP31-201ENST00000405422 495 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 RPL23AP48-201ENST00000406913 488 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 RN7SKP177-201ENST00000410567 355 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 EI24P1-201ENST00000416584 867 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.12□□□□□ -1.59
RHBDL3P58872 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.12□□□□□ -1.59
RHBDL3P58872 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC5.12□□□□□ -1.59
RHBDL3P58872 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDL3P58872 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 COX6B1P7-201ENST00000430845 235 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 MTND4P6-201ENST00000438297 472 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.12□□□□□ -1.59
RHBDL3P58872 VN1R32P-201ENST00000452234 905 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 RPL7P22-201ENST00000466005 733 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 AL136126.1-201ENST00000473603 402 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 AP000926.1-201ENST00000479573 241 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.12□□□□□ -1.59
RHBDL3P58872 AC020699.1-201ENST00000505161 445 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.12□□□□□ -1.59
RHBDL3P58872 AC108064.1-201ENST00000513791 460 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.12□□□□□ -1.59
RHBDL3P58872 AL669831.4-202ENST00000590817 238 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.12□□□□□ -1.59
RHBDL3P58872 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.12□□□□□ -1.59
RHBDL3P58872 AC097478.2-201ENST00000610572 514 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
RHBDL3P58872 AC107075.1-201ENST00000613695 314 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 AC004825.2-201ENST00000616634 455 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.12□□□□□ -1.59
RHBDL3P58872 AC069209.1-201ENST00000619282 651 ntBASIC5.12□□□□□ -1.59
RHBDL3P58872 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.12□□□□□ -1.59
RHBDL3P58872 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDL3P58872 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.12□□□□□ -1.59
RHBDL3P58872 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
RHBDL3P58872 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDL3P58872 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.12□□□□□ -1.59
RHBDL3P58872 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDL3P58872 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RHBDL3P58872 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RHBDL3P58872 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RHBDL3P58872 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RHBDL3P58872 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.11□□□□□ -1.59
RHBDL3P58872 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.11□□□□□ -1.59
RHBDL3P58872 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RHBDL3P58872 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RHBDL3P58872 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RHBDL3P58872 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RHBDL3P58872 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RHBDL3P58872 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RHBDL3P58872 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RHBDL3P58872 RNU6-761P-201ENST00000384148 107 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 Y_RNA.493-201ENST00000384422 102 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 RNA5SP56-201ENST00000410277 118 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.11□□□□□ -1.59
RHBDL3P58872 RPL23AP25-201ENST00000430973 463 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.11□□□□□ -1.59
RHBDL3P58872 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.11□□□□□ -1.59
RHBDL3P58872 RPL23AP81-201ENST00000455252 467 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 RNA5SP103-201ENST00000459503 118 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 PLGLA-201ENST00000465668 449 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.11□□□□□ -1.59
RHBDL3P58872 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
RHBDL3P58872 MTCO3P44-201ENST00000510977 541 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.11□□□□□ -1.59
RHBDL3P58872 KCTD9P2-201ENST00000512203 1013 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 AC023141.12-201ENST00000512399 199 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.11□□□□□ -1.59
RHBDL3P58872 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RHBDL3P58872 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
RHBDL3P58872 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.11□□□□□ -1.59
RHBDL3P58872 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
RHBDL3P58872 OR8R1P-201ENST00000543943 764 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 AL352979.3-201ENST00000553515 247 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RHBDL3P58872 AC009712.1-201ENST00000564938 316 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.11□□□□□ -1.59
RHBDL3P58872 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.11□□□□□ -1.59
RHBDL3P58872 AC013470.4-201ENST00000619978 986 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.11□□□□□ -1.59
RHBDL3P58872 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RHBDL3P58872 C2orf27A-204ENST00000623058 969 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RHBDL3P58872 AL390862.1-201ENST00000635467 1469 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 AC012020.1-201ENST00000624541 1728 ntBASIC5.11□□□□□ -1.59
RHBDL3P58872 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RHBDL3P58872 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RHBDL3P58872 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.1□□□□□ -1.59
RHBDL3P58872 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.1□□□□□ -1.59
RHBDL3P58872 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RHBDL3P58872 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms