Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 ENSAP3-201ENST00000312710 333 ntBASIC3.97□□□□□ -1.77
PEX3P56589 RNU1-18P-201ENST00000363062 164 ntBASIC3.97□□□□□ -1.77
PEX3P56589 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PEX3P56589 RNU6-932P-201ENST00000391108 106 ntBASIC3.97□□□□□ -1.77
PEX3P56589 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PEX3P56589 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.97□□□□□ -1.77
PEX3P56589 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.97□□□□□ -1.77
PEX3P56589 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.97□□□□□ -1.77
PEX3P56589 DBIP2-201ENST00000419076 262 ntBASIC3.97□□□□□ -1.77
PEX3P56589 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.97□□□□□ -1.77
PEX3P56589 AL354692.1-201ENST00000423044 315 ntBASIC3.97□□□□□ -1.77
PEX3P56589 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.97□□□□□ -1.77
PEX3P56589 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.97□□□□□ -1.77
PEX3P56589 HSPD1P21-201ENST00000436541 245 ntBASIC3.97□□□□□ -1.77
PEX3P56589 CBX1P4-201ENST00000439415 457 ntBASIC3.97□□□□□ -1.77
PEX3P56589 RNF2P1-201ENST00000442955 1010 ntBASIC3.97□□□□□ -1.77
PEX3P56589 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.97□□□□□ -1.77
PEX3P56589 IFNWP4-201ENST00000453148 294 ntBASIC3.97□□□□□ -1.77
PEX3P56589 AC010307.1-201ENST00000467206 836 ntBASIC3.97□□□□□ -1.77
PEX3P56589 RPS17P11-201ENST00000474297 293 ntBASIC3.97□□□□□ -1.77
PEX3P56589 AC005726.1-201ENST00000494679 427 ntBASIC3.97□□□□□ -1.77
PEX3P56589 AP002812.1-201ENST00000495378 474 ntBASIC3.97□□□□□ -1.77
PEX3P56589 FTH1P24-201ENST00000503502 462 ntBASIC3.97□□□□□ -1.77
PEX3P56589 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.97□□□□□ -1.77
PEX3P56589 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.97□□□□□ -1.77
PEX3P56589 AC119751.4-201ENST00000507498 357 ntBASIC3.97□□□□□ -1.77
PEX3P56589 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.97□□□□□ -1.77
PEX3P56589 AC027104.1-201ENST00000563702 681 ntBASIC3.97□□□□□ -1.77
PEX3P56589 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.97□□□□□ -1.77
PEX3P56589 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.97□□□□□ -1.77
PEX3P56589 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.97□□□□□ -1.77
PEX3P56589 MIR4429-201ENST00000580105 73 ntBASIC3.97□□□□□ -1.77
PEX3P56589 AC008507.2-201ENST00000588402 1176 ntBASIC3.97□□□□□ -1.77
PEX3P56589 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.97□□□□□ -1.77
PEX3P56589 AC020914.6-201ENST00000594327 272 ntBASIC3.97□□□□□ -1.77
PEX3P56589 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.97□□□□□ -1.77
PEX3P56589 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.97□□□□□ -1.77
PEX3P56589 AC006946.3-201ENST00000609791 756 ntBASIC3.97□□□□□ -1.77
PEX3P56589 AC069209.1-201ENST00000619282 651 ntBASIC3.97□□□□□ -1.77
PEX3P56589 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.97□□□□□ -1.77
PEX3P56589 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
PEX3P56589 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
PEX3P56589 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
PEX3P56589 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.96□□□□□ -1.78
PEX3P56589 AL161912.2-201ENST00000565707 3007 ntBASIC3.96□□□□□ -1.78
PEX3P56589 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PEX3P56589 AC073073.2-201ENST00000609827 2578 ntBASIC3.96□□□□□ -1.78
PEX3P56589 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PEX3P56589 MIR620-201ENST00000385232 95 ntBASIC3.96□□□□□ -1.78
PEX3P56589 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PEX3P56589 SDCBPP2-201ENST00000424643 885 ntBASIC3.96□□□□□ -1.78
PEX3P56589 DEFB130D-201ENST00000426866 237 ntBASIC3.96□□□□□ -1.78
PEX3P56589 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.96□□□□□ -1.78
PEX3P56589 RPL12P46-201ENST00000436610 195 ntBASIC3.96□□□□□ -1.78
PEX3P56589 AC068135.1-201ENST00000446164 246 ntBASIC3.96□□□□□ -1.78
PEX3P56589 MTND2P8-201ENST00000450555 1025 ntBASIC3.96□□□□□ -1.78
PEX3P56589 AL354710.1-201ENST00000453641 246 ntBASIC3.96□□□□□ -1.78
PEX3P56589 RPL21P129-201ENST00000491732 478 ntBASIC3.96□□□□□ -1.78
PEX3P56589 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.96□□□□□ -1.78
PEX3P56589 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PEX3P56589 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.96□□□□□ -1.78
PEX3P56589 USP9YP5-201ENST00000511770 630 ntBASIC3.96□□□□□ -1.78
PEX3P56589 AC010374.2-201ENST00000512933 535 ntBASIC3.96□□□□□ -1.78
PEX3P56589 NARSP2-201ENST00000518524 679 ntBASIC3.96□□□□□ -1.78
PEX3P56589 AC008489.1-201ENST00000524271 483 ntBASIC3.96□□□□□ -1.78
PEX3P56589 AC011492.1-201ENST00000600023 315 ntBASIC3.96□□□□□ -1.78
PEX3P56589 AC123786.2-201ENST00000603459 275 ntBASIC3.96□□□□□ -1.78
PEX3P56589 SNORA51-201ENST00000606420 132 ntBASIC3.96□□□□□ -1.78
PEX3P56589 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.96□□□□□ -1.78
PEX3P56589 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.96□□□□□ -1.78
PEX3P56589 AL590396.2-201ENST00000636511 1041 ntBASIC3.96□□□□□ -1.78
PEX3P56589 OR6C71P-202ENST00000641886 1107 ntBASIC3.96□□□□□ -1.78
PEX3P56589 MTND4P10-201ENST00000446199 1363 ntBASIC3.96□□□□□ -1.78
PEX3P56589 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PEX3P56589 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PEX3P56589 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
PEX3P56589 PHKBP1-201ENST00000450951 1951 ntBASIC3.96□□□□□ -1.78
PEX3P56589 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
PEX3P56589 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PEX3P56589 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
PEX3P56589 RNU6-317P-201ENST00000384031 107 ntBASIC3.95□□□□□ -1.78
PEX3P56589 MIR92A2-201ENST00000385299 75 ntBASIC3.95□□□□□ -1.78
PEX3P56589 SNORD65C-201ENST00000390962 71 ntBASIC3.95□□□□□ -1.78
PEX3P56589 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.95□□□□□ -1.78
PEX3P56589 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.95□□□□□ -1.78
PEX3P56589 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
PEX3P56589 RPS26P40-201ENST00000435209 294 ntBASIC3.95□□□□□ -1.78
PEX3P56589 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.95□□□□□ -1.78
PEX3P56589 FABP5P3-201ENST00000437960 408 ntBASIC3.95□□□□□ -1.78
PEX3P56589 HSFY3P-201ENST00000444242 1191 ntBASIC3.95□□□□□ -1.78
PEX3P56589 AC073387.1-201ENST00000453261 709 ntBASIC3.95□□□□□ -1.78
PEX3P56589 SNORD105B-201ENST00000458770 79 ntBASIC3.95□□□□□ -1.78
PEX3P56589 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.95□□□□□ -1.78
PEX3P56589 AC069306.1-201ENST00000507006 843 ntBASIC3.95□□□□□ -1.78
PEX3P56589 RN7SKP13-201ENST00000515933 244 ntBASIC3.95□□□□□ -1.78
PEX3P56589 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.95□□□□□ -1.78
PEX3P56589 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.95□□□□□ -1.78
PEX3P56589 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.95□□□□□ -1.78
PEX3P56589 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.95□□□□□ -1.78
PEX3P56589 AGGF1P8-201ENST00000562979 1000 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms