Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.5□□□□□ -1.69
HDAC4P56524 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.5□□□□□ -1.69
HDAC4P56524 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.5□□□□□ -1.69
HDAC4P56524 AC105227.2-201ENST00000615075 605 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.5□□□□□ -1.69
HDAC4P56524 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.5□□□□□ -1.69
HDAC4P56524 AC068831.8-201ENST00000620171 435 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HDAC4P56524 AC140479.6-201ENST00000633535 357 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
HDAC4P56524 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.5□□□□□ -1.69
HDAC4P56524 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HDAC4P56524 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.5□□□□□ -1.69
HDAC4P56524 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HDAC4P56524 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HDAC4P56524 AC016716.1-201ENST00000265882 708 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 Y_RNA.126-201ENST00000363382 111 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 MIR217-201ENST00000384817 110 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.49□□□□□ -1.69
HDAC4P56524 RPL7P44-201ENST00000424827 742 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.49□□□□□ -1.69
HDAC4P56524 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.49□□□□□ -1.69
HDAC4P56524 RSL24D1P6-201ENST00000426934 401 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 AC008065.1-201ENST00000428525 348 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 NPM1P34-201ENST00000428821 893 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 RPS29P17-201ENST00000430795 166 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 AC011998.1-201ENST00000433403 117 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.49□□□□□ -1.69
HDAC4P56524 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HDAC4P56524 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.49□□□□□ -1.69
HDAC4P56524 RPL7P59-201ENST00000447700 943 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.49□□□□□ -1.69
HDAC4P56524 AC106872.2-201ENST00000494303 480 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 AC104164.2-201ENST00000496953 495 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.49□□□□□ -1.69
HDAC4P56524 AC090071.1-201ENST00000507713 644 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 AC109471.1-201ENST00000511631 612 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 AC008837.2-201ENST00000513076 418 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.49□□□□□ -1.69
HDAC4P56524 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.49□□□□□ -1.69
HDAC4P56524 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HDAC4P56524 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.49□□□□□ -1.69
HDAC4P56524 PHBP17-201ENST00000528576 541 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HDAC4P56524 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.49□□□□□ -1.69
HDAC4P56524 AC074029.1-201ENST00000552531 1044 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 AL109766.1-201ENST00000555080 552 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.49□□□□□ -1.69
HDAC4P56524 AC022662.1-201ENST00000580252 331 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 AC115621.1-201ENST00000604653 858 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 AL356218.2-201ENST00000605264 187 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.49□□□□□ -1.69
HDAC4P56524 AL445363.3-201ENST00000623080 671 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.49□□□□□ -1.69
HDAC4P56524 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HDAC4P56524 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HDAC4P56524 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HDAC4P56524 Z99496.1-201ENST00000469424 1477 ntBASIC4.49□□□□□ -1.69
HDAC4P56524 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.49□□□□□ -1.69
HDAC4P56524 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HDAC4P56524 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.48□□□□□ -1.69
HDAC4P56524 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HDAC4P56524 DBF4P1-201ENST00000412976 1892 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HDAC4P56524 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.48□□□□□ -1.69
HDAC4P56524 RNU1-15P-201ENST00000353977 144 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 RNA5SP388-201ENST00000362584 119 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 RHOT1P2-201ENST00000366423 333 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HDAC4P56524 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.48□□□□□ -1.69
HDAC4P56524 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HDAC4P56524 SNORD65.1-201ENST00000390889 71 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 RSL24D1P4-201ENST00000400938 484 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 NRBF2P2-201ENST00000413087 861 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 NUP35P2-201ENST00000416748 943 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.48□□□□□ -1.69
HDAC4P56524 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.48□□□□□ -1.69
HDAC4P56524 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 GTF2IP23-201ENST00000423746 351 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 AL157831.1-201ENST00000426134 473 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.48□□□□□ -1.69
HDAC4P56524 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.48□□□□□ -1.69
HDAC4P56524 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.48□□□□□ -1.69
HDAC4P56524 USP9YP22-201ENST00000438971 294 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 AC092393.1-201ENST00000439625 742 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 RPL23AP76-201ENST00000441860 458 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 RAB11AP1-201ENST00000442978 646 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.48□□□□□ -1.69
HDAC4P56524 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.48□□□□□ -1.69
HDAC4P56524 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.48□□□□□ -1.69
HDAC4P56524 AC011276.1-201ENST00000469688 323 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 MTND2P14-201ENST00000482139 351 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 RN7SL691P-201ENST00000494487 301 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.48□□□□□ -1.69
HDAC4P56524 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.48□□□□□ -1.69
HDAC4P56524 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.48□□□□□ -1.69
HDAC4P56524 AC093824.1-201ENST00000508796 343 ntBASIC4.48□□□□□ -1.69
HDAC4P56524 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.48□□□□□ -1.69
HDAC4P56524 RNU5A-4P-201ENST00000516588 111 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms