Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC104306.1-201ENST00000449702 371 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 FABP3P2-201ENST00000453169 399 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.22□□□□□ -1.73
LIMK1P53667 RPL6P9-201ENST00000466502 859 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 TRAV31-201ENST00000502780 342 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
LIMK1P53667 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.22□□□□□ -1.73
LIMK1P53667 PPBPP1-201ENST00000510807 373 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.22□□□□□ -1.73
LIMK1P53667 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.22□□□□□ -1.73
LIMK1P53667 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.22□□□□□ -1.73
LIMK1P53667 ZNF415P1-201ENST00000582279 1166 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.22□□□□□ -1.73
LIMK1P53667 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.22□□□□□ -1.73
LIMK1P53667 AC010928.3-201ENST00000587712 541 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 AL020997.3-201ENST00000602843 359 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 AC023762.1-201ENST00000603280 584 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 AC069431.2-201ENST00000604149 1099 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LIMK1P53667 AC112220.2-201ENST00000605513 533 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 AP004247.3-201ENST00000608682 624 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 AP000238.1-201ENST00000608759 426 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LIMK1P53667 MIR4278-201ENST00000636094 69 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LIMK1P53667 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
LIMK1P53667 AL133383.2-201ENST00000622958 2336 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LIMK1P53667 LINC00561-201ENST00000565815 2738 ntBASIC4.22□□□□□ -1.73
LIMK1P53667 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.22□□□□□ -1.73
LIMK1P53667 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.22□□□□□ -1.73
LIMK1P53667 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
LIMK1P53667 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
LIMK1P53667 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
LIMK1P53667 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LIMK1P53667 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.21□□□□□ -1.74
LIMK1P53667 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
LIMK1P53667 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
LIMK1P53667 Y_RNA.111-201ENST00000363248 100 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 SNORA73.2-201ENST00000364946 201 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
LIMK1P53667 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.21□□□□□ -1.74
LIMK1P53667 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LIMK1P53667 DSTNP4-201ENST00000399472 474 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 RN7SKP235-201ENST00000410662 305 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 RNA5SP39-201ENST00000411245 120 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 RAB9AP3-201ENST00000412737 573 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 MFSD13B-201ENST00000420133 1290 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 SFR1P2-201ENST00000421841 730 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC4.21□□□□□ -1.74
LIMK1P53667 YWHAZP8-201ENST00000436935 731 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 PTGES3P1-201ENST00000439531 483 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.21□□□□□ -1.74
LIMK1P53667 RAB11AP1-201ENST00000442978 646 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 NOTCH2P1-201ENST00000443481 624 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 AL590399.6-201ENST00000446396 307 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.21□□□□□ -1.74
LIMK1P53667 RAB9AP1-201ENST00000449393 573 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 ANP32BP2-201ENST00000454525 545 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 CEACAMP4-201ENST00000457676 421 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 SNORA59A-201ENST00000459326 152 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 AC025445.1-201ENST00000502728 300 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 AC006499.5-201ENST00000505037 514 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 AC011352.3-201ENST00000505162 593 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 TPT1P8-201ENST00000510120 555 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 AC109471.1-201ENST00000511631 612 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 RNA5SP154-201ENST00000516193 111 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 RNA5SP519-201ENST00000516480 119 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 SNORA70.24-201ENST00000517233 118 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 AC091163.3-201ENST00000518269 1144 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 OR8I1P-201ENST00000529291 931 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LIMK1P53667 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.21□□□□□ -1.74
LIMK1P53667 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.21□□□□□ -1.74
LIMK1P53667 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.21□□□□□ -1.74
LIMK1P53667 MIR4504-201ENST00000577413 92 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.21□□□□□ -1.74
LIMK1P53667 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.21□□□□□ -1.74
LIMK1P53667 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.21□□□□□ -1.74
LIMK1P53667 AL445435.1-201ENST00000604232 665 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 AC016597.2-201ENST00000613256 341 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 AL391261.4-201ENST00000616012 481 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 AC109454.4-201ENST00000623411 649 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 MTND4P8-201ENST00000514997 1362 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
LIMK1P53667 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LIMK1P53667 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.21□□□□□ -1.74
LIMK1P53667 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.21□□□□□ -1.74
LIMK1P53667 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LIMK1P53667 AL157700.1-201ENST00000561973 1432 ntBASIC4.21□□□□□ -1.74
LIMK1P53667 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.2□□□□□ -1.74
LIMK1P53667 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
LIMK1P53667 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LIMK1P53667 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
LIMK1P53667 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LIMK1P53667 USP8P1-201ENST00000494673 3183 ntBASIC4.2□□□□□ -1.74
LIMK1P53667 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LIMK1P53667 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.2□□□□□ -1.74
LIMK1P53667 MIR448-201ENST00000362131 111 ntBASIC4.2□□□□□ -1.74
LIMK1P53667 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms