Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC099669.2-201ENST00000616549 437 ntBASIC4.01□□□□□ -1.77
PDX1P52945 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.01□□□□□ -1.77
PDX1P52945 AC011330.2-201ENST00000621680 635 ntBASIC4.01□□□□□ -1.77
PDX1P52945 AC124312.6-202ENST00000623624 418 ntBASIC4.01□□□□□ -1.77
PDX1P52945 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PDX1P52945 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PDX1P52945 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDX1P52945 NOL8P1-201ENST00000508336 3529 ntBASIC4.01□□□□□ -1.77
PDX1P52945 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDX1P52945 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PDX1P52945 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.01□□□□□ -1.77
PDX1P52945 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PDX1P52945 AC114546.3-201ENST00000623582 1734 ntBASIC4.01□□□□□ -1.77
PDX1P52945 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PDX1P52945 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDX1P52945 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
PDX1P52945 SLC2A3P1-201ENST00000519666 1451 ntBASIC4□□□□□ -1.77
PDX1P52945 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
PDX1P52945 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4□□□□□ -1.77
PDX1P52945 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDX1P52945 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4□□□□□ -1.77
PDX1P52945 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
PDX1P52945 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4□□□□□ -1.77
PDX1P52945 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4□□□□□ -1.77
PDX1P52945 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDX1P52945 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4□□□□□ -1.77
PDX1P52945 NACA3P-201ENST00000359690 648 ntBASIC4□□□□□ -1.77
PDX1P52945 SNORD116-23-201ENST00000384645 92 ntBASIC4□□□□□ -1.77
PDX1P52945 HNRNPDP2-201ENST00000406475 478 ntBASIC4□□□□□ -1.77
PDX1P52945 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC4□□□□□ -1.77
PDX1P52945 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4□□□□□ -1.77
PDX1P52945 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4□□□□□ -1.77
PDX1P52945 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4□□□□□ -1.77
PDX1P52945 RPS20P1-201ENST00000434853 354 ntBASIC4□□□□□ -1.77
PDX1P52945 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4□□□□□ -1.77
PDX1P52945 AC084290.1-201ENST00000434995 374 ntBASIC4□□□□□ -1.77
PDX1P52945 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4□□□□□ -1.77
PDX1P52945 MTCYBP35-201ENST00000503630 1137 ntBASIC4□□□□□ -1.77
PDX1P52945 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4□□□□□ -1.77
PDX1P52945 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4□□□□□ -1.77
PDX1P52945 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4□□□□□ -1.77
PDX1P52945 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4□□□□□ -1.77
PDX1P52945 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4□□□□□ -1.77
PDX1P52945 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4□□□□□ -1.77
PDX1P52945 MIR3912-201ENST00000577566 105 ntBASIC4□□□□□ -1.77
PDX1P52945 AC017100.2-201ENST00000584628 355 ntBASIC4□□□□□ -1.77
PDX1P52945 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4□□□□□ -1.77
PDX1P52945 AC107075.1-201ENST00000613695 314 ntBASIC4□□□□□ -1.77
PDX1P52945 MIR6075-201ENST00000620782 95 ntBASIC4□□□□□ -1.77
PDX1P52945 AC012442.3-202ENST00000636742 206 ntBASIC4□□□□□ -1.77
PDX1P52945 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDX1P52945 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDX1P52945 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4□□□□□ -1.77
PDX1P52945 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PDX1P52945 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PDX1P52945 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PDX1P52945 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.99□□□□□ -1.77
PDX1P52945 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.99□□□□□ -1.77
PDX1P52945 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.99□□□□□ -1.77
PDX1P52945 DDX18P3-201ENST00000404856 2007 ntBASIC3.99□□□□□ -1.77
PDX1P52945 AC107081.3-201ENST00000612715 2034 ntBASIC3.99□□□□□ -1.77
PDX1P52945 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PDX1P52945 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.99□□□□□ -1.77
PDX1P52945 RNA5SP124-201ENST00000362739 110 ntBASIC3.99□□□□□ -1.77
PDX1P52945 RNU6-413P-201ENST00000384115 107 ntBASIC3.99□□□□□ -1.77
PDX1P52945 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PDX1P52945 PTMAP2-201ENST00000397627 327 ntBASIC3.99□□□□□ -1.77
PDX1P52945 RNU4-6P-201ENST00000410804 122 ntBASIC3.99□□□□□ -1.77
PDX1P52945 RPL22P18-201ENST00000417197 377 ntBASIC3.99□□□□□ -1.77
PDX1P52945 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.99□□□□□ -1.77
PDX1P52945 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.99□□□□□ -1.77
PDX1P52945 RPL7P44-201ENST00000424827 742 ntBASIC3.99□□□□□ -1.77
PDX1P52945 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.99□□□□□ -1.77
PDX1P52945 AC018644.1-201ENST00000429934 551 ntBASIC3.99□□□□□ -1.77
PDX1P52945 MTCO1P54-201ENST00000430139 712 ntBASIC3.99□□□□□ -1.77
PDX1P52945 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.99□□□□□ -1.77
PDX1P52945 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PDX1P52945 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.99□□□□□ -1.77
PDX1P52945 HLA-N-201ENST00000437516 135 ntBASIC3.99□□□□□ -1.77
PDX1P52945 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.99□□□□□ -1.77
PDX1P52945 PPIAP17-201ENST00000438507 471 ntBASIC3.99□□□□□ -1.77
PDX1P52945 AC093155.1-201ENST00000440164 826 ntBASIC3.99□□□□□ -1.77
PDX1P52945 RPL23AP76-201ENST00000441860 458 ntBASIC3.99□□□□□ -1.77
PDX1P52945 AL591719.1-201ENST00000444669 744 ntBASIC3.99□□□□□ -1.77
PDX1P52945 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.99□□□□□ -1.77
PDX1P52945 AC011979.1-201ENST00000472300 483 ntBASIC3.99□□□□□ -1.77
PDX1P52945 RPS29P19-201ENST00000479709 171 ntBASIC3.99□□□□□ -1.77
PDX1P52945 AC108145.1-201ENST00000503770 153 ntBASIC3.99□□□□□ -1.77
PDX1P52945 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.99□□□□□ -1.77
PDX1P52945 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.99□□□□□ -1.77
PDX1P52945 RN7SKP96-201ENST00000516948 297 ntBASIC3.99□□□□□ -1.77
PDX1P52945 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.99□□□□□ -1.77
PDX1P52945 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.99□□□□□ -1.77
PDX1P52945 AC026407.1-201ENST00000518369 204 ntBASIC3.99□□□□□ -1.77
PDX1P52945 MRPS36P3-201ENST00000519284 130 ntBASIC3.99□□□□□ -1.77
PDX1P52945 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.99□□□□□ -1.77
PDX1P52945 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.99□□□□□ -1.77
PDX1P52945 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.99□□□□□ -1.77
PDX1P52945 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.99□□□□□ -1.77
PDX1P52945 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms