Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL022722.2-201ENST00000402519 180 ntBASIC3.17□□□□□ -1.9
GTF2A1P52655 SNORA3.3-201ENST00000408712 125 ntBASIC3.17□□□□□ -1.9
GTF2A1P52655 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.17□□□□□ -1.9
GTF2A1P52655 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.17□□□□□ -1.9
GTF2A1P52655 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.17□□□□□ -1.9
GTF2A1P52655 AC245028.1-201ENST00000423259 256 ntBASIC3.17□□□□□ -1.9
GTF2A1P52655 RPL18P10-201ENST00000425606 538 ntBASIC3.17□□□□□ -1.9
GTF2A1P52655 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.17□□□□□ -1.9
GTF2A1P52655 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.17□□□□□ -1.9
GTF2A1P52655 Z99127.3-201ENST00000448158 395 ntBASIC3.17□□□□□ -1.9
GTF2A1P52655 RPL7P52-201ENST00000449200 742 ntBASIC3.17□□□□□ -1.9
GTF2A1P52655 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.17□□□□□ -1.9
GTF2A1P52655 AIG1P1-201ENST00000503376 148 ntBASIC3.17□□□□□ -1.9
GTF2A1P52655 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
GTF2A1P52655 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.17□□□□□ -1.9
GTF2A1P52655 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.17□□□□□ -1.9
GTF2A1P52655 FTH1P21-201ENST00000512179 511 ntBASIC3.17□□□□□ -1.9
GTF2A1P52655 RN7SKP244-201ENST00000516513 307 ntBASIC3.17□□□□□ -1.9
GTF2A1P52655 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.17□□□□□ -1.9
GTF2A1P52655 AC090695.1-201ENST00000561269 1222 ntBASIC3.17□□□□□ -1.9
GTF2A1P52655 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.17□□□□□ -1.9
GTF2A1P52655 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.17□□□□□ -1.9
GTF2A1P52655 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.17□□□□□ -1.9
GTF2A1P52655 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.17□□□□□ -1.9
GTF2A1P52655 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
GTF2A1P52655 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.17□□□□□ -1.9
GTF2A1P52655 MIR492-201ENST00000638676 116 ntBASIC3.17□□□□□ -1.9
GTF2A1P52655 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.17□□□□□ -1.9
GTF2A1P52655 ZNF33CP-201ENST00000432492 2030 ntBASIC3.16□□□□□ -1.9
GTF2A1P52655 METTL21EP-201ENST00000298105 713 ntBASIC3.16□□□□□ -1.9
GTF2A1P52655 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
GTF2A1P52655 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
GTF2A1P52655 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
GTF2A1P52655 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.16□□□□□ -1.9
GTF2A1P52655 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.16□□□□□ -1.9
GTF2A1P52655 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.16□□□□□ -1.9
GTF2A1P52655 RCC2P2-201ENST00000422174 918 ntBASIC3.16□□□□□ -1.9
GTF2A1P52655 AL139247.1-201ENST00000422768 325 ntBASIC3.16□□□□□ -1.9
GTF2A1P52655 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.16□□□□□ -1.9
GTF2A1P52655 CST9LP2-201ENST00000437612 320 ntBASIC3.16□□□□□ -1.9
GTF2A1P52655 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.16□□□□□ -1.9
GTF2A1P52655 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.16□□□□□ -1.9
GTF2A1P52655 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.16□□□□□ -1.9
GTF2A1P52655 AC010655.1-201ENST00000449336 292 ntBASIC3.16□□□□□ -1.9
GTF2A1P52655 AC027673.1-201ENST00000456245 405 ntBASIC3.16□□□□□ -1.9
GTF2A1P52655 RN7SL594P-201ENST00000470590 287 ntBASIC3.16□□□□□ -1.9
GTF2A1P52655 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.16□□□□□ -1.9
GTF2A1P52655 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.16□□□□□ -1.9
GTF2A1P52655 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.16□□□□□ -1.9
GTF2A1P52655 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.16□□□□□ -1.9
GTF2A1P52655 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.16□□□□□ -1.9
GTF2A1P52655 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.16□□□□□ -1.9
GTF2A1P52655 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.16□□□□□ -1.9
GTF2A1P52655 AC125611.2-201ENST00000551907 647 ntBASIC3.16□□□□□ -1.9
GTF2A1P52655 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
GTF2A1P52655 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.16□□□□□ -1.9
GTF2A1P52655 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC3.16□□□□□ -1.9
GTF2A1P52655 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.16□□□□□ -1.9
GTF2A1P52655 MLECP1-201ENST00000615893 709 ntBASIC3.16□□□□□ -1.9
GTF2A1P52655 AC091046.2-201ENST00000620775 665 ntBASIC3.16□□□□□ -1.9
GTF2A1P52655 AL121594.5-201ENST00000631724 573 ntBASIC3.16□□□□□ -1.9
GTF2A1P52655 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
GTF2A1P52655 RNU6-600P-201ENST00000362524 99 ntBASIC3.15□□□□□ -1.91
GTF2A1P52655 RNU1-32P-201ENST00000363937 159 ntBASIC3.15□□□□□ -1.91
GTF2A1P52655 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.15□□□□□ -1.91
GTF2A1P52655 AC096644.3-201ENST00000416788 338 ntBASIC3.15□□□□□ -1.91
GTF2A1P52655 RPS6P14-201ENST00000425165 719 ntBASIC3.15□□□□□ -1.91
GTF2A1P52655 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.15□□□□□ -1.91
GTF2A1P52655 AC009961.3-201ENST00000449832 765 ntBASIC3.15□□□□□ -1.91
GTF2A1P52655 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
GTF2A1P52655 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.15□□□□□ -1.91
GTF2A1P52655 RPS7P7-201ENST00000463499 571 ntBASIC3.15□□□□□ -1.91
GTF2A1P52655 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.15□□□□□ -1.91
GTF2A1P52655 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.15□□□□□ -1.91
GTF2A1P52655 AC034205.1-201ENST00000520621 638 ntBASIC3.15□□□□□ -1.91
GTF2A1P52655 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.15□□□□□ -1.91
GTF2A1P52655 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.15□□□□□ -1.91
GTF2A1P52655 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.15□□□□□ -1.91
GTF2A1P52655 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.15□□□□□ -1.91
GTF2A1P52655 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.15□□□□□ -1.91
GTF2A1P52655 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.15□□□□□ -1.91
GTF2A1P52655 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.15□□□□□ -1.91
GTF2A1P52655 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.15□□□□□ -1.91
GTF2A1P52655 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.15□□□□□ -1.91
GTF2A1P52655 AC096947.1-201ENST00000603233 470 ntBASIC3.15□□□□□ -1.91
GTF2A1P52655 AC073387.2-201ENST00000604797 784 ntBASIC3.15□□□□□ -1.91
GTF2A1P52655 RNU1-30P-201ENST00000606575 163 ntBASIC3.15□□□□□ -1.91
GTF2A1P52655 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.15□□□□□ -1.91
GTF2A1P52655 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.15□□□□□ -1.91
GTF2A1P52655 AL445423.1-201ENST00000609941 536 ntBASIC3.15□□□□□ -1.91
GTF2A1P52655 AC005962.2-201ENST00000611427 652 ntBASIC3.15□□□□□ -1.91
GTF2A1P52655 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.15□□□□□ -1.91
GTF2A1P52655 FO624990.1-201ENST00000636373 85 ntBASIC3.15□□□□□ -1.91
GTF2A1P52655 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.15□□□□□ -1.91
GTF2A1P52655 AL136520.1-201ENST00000600311 1322 ntBASIC3.15□□□□□ -1.91
GTF2A1P52655 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
GTF2A1P52655 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.14□□□□□ -1.91
GTF2A1P52655 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
GTF2A1P52655 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.14□□□□□ -1.91
GTF2A1P52655 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms