Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLCNKAP51800 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLCNKAP51800 SNORD116-8-201ENST00000384365 95 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 RNU2-65P-201ENST00000410162 185 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 RNA5SP36-201ENST00000410197 133 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 RN7SKP235-201ENST00000410662 305 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.21□□□□□ -1.74
CLCNKAP51800 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.21□□□□□ -1.74
CLCNKAP51800 AC011233.1-201ENST00000422812 283 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.21□□□□□ -1.74
CLCNKAP51800 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.21□□□□□ -1.74
CLCNKAP51800 USP9YP31-201ENST00000431405 881 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 BTF3P10-201ENST00000433415 495 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 RPS26P40-201ENST00000435209 294 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 PPIAP17-201ENST00000438507 471 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 AC092393.1-201ENST00000439625 742 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.21□□□□□ -1.74
CLCNKAP51800 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.21□□□□□ -1.74
CLCNKAP51800 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.21□□□□□ -1.74
CLCNKAP51800 FTH1P24-201ENST00000503502 462 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.21□□□□□ -1.74
CLCNKAP51800 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.21□□□□□ -1.74
CLCNKAP51800 KCTD9P2-201ENST00000512203 1013 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 MRPS33P3-201ENST00000513456 322 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 AC118465.1-201ENST00000513820 1271 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 HIGD1AP6-201ENST00000521833 279 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 AP003461.1-201ENST00000528866 78 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.21□□□□□ -1.74
CLCNKAP51800 CYCSP29-201ENST00000533731 318 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 AP000619.3-201ENST00000535634 1127 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 AC091515.1-201ENST00000548110 679 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 AL109766.1-201ENST00000555080 552 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.21□□□□□ -1.74
CLCNKAP51800 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.21□□□□□ -1.74
CLCNKAP51800 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CLCNKAP51800 BNIP3P26-201ENST00000600827 554 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 AL158042.1-201ENST00000605338 460 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.21□□□□□ -1.74
CLCNKAP51800 AL451074.6-201ENST00000608512 729 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 AC131235.4-201ENST00000609288 620 ntBASIC4.21□□□□□ -1.74
CLCNKAP51800 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.21□□□□□ -1.74
CLCNKAP51800 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLCNKAP51800 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.21□□□□□ -1.74
CLCNKAP51800 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.21□□□□□ -1.74
CLCNKAP51800 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CLCNKAP51800 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLCNKAP51800 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CLCNKAP51800 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CLCNKAP51800 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLCNKAP51800 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CLCNKAP51800 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCNKAP51800 AP000776.1-201ENST00000530032 1663 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AC016716.1-201ENST00000265882 708 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
CLCNKAP51800 MIR383-201ENST00000362257 73 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 RNU6-582P-201ENST00000362989 107 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCNKAP51800 SNORA70C-201ENST00000384538 135 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 RNU6-1151P-201ENST00000384684 107 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AL139098.1-201ENST00000407291 389 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCNKAP51800 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLCNKAP51800 RNU6-757P-201ENST00000410334 100 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCNKAP51800 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLCNKAP51800 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCNKAP51800 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.2□□□□□ -1.74
CLCNKAP51800 AL139421.1-201ENST00000423010 169 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCNKAP51800 AC023347.2-201ENST00000433994 462 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 MTND3P1-201ENST00000441336 220 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCNKAP51800 AL133217.1-201ENST00000450980 425 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 RFC5P1-201ENST00000454419 874 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AL133477.1-201ENST00000457472 514 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CLCNKAP51800 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCNKAP51800 AC012170.1-201ENST00000495139 359 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AC104090.1-201ENST00000506341 1171 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.2□□□□□ -1.74
CLCNKAP51800 AC108475.1-201ENST00000507880 950 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 MTCYBP16-201ENST00000509187 1129 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCNKAP51800 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCNKAP51800 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.2□□□□□ -1.74
CLCNKAP51800 RNA5SP135-201ENST00000517019 125 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.2□□□□□ -1.74
CLCNKAP51800 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.2□□□□□ -1.74
CLCNKAP51800 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.2□□□□□ -1.74
CLCNKAP51800 AC006064.5-201ENST00000541782 248 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AC025884.1-201ENST00000556034 378 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AL132657.2-201ENST00000564417 358 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AC008638.3-201ENST00000603341 463 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AL139395.1-201ENST00000603662 160 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AL031281.1-201ENST00000604049 488 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AL139418.1-201ENST00000613613 177 ntBASIC4.2□□□□□ -1.74
CLCNKAP51800 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.2□□□□□ -1.74
CLCNKAP51800 AC099669.2-201ENST00000616549 437 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms