Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 OR52B1P-201ENST00000316506 909 ntBASIC4.2□□□□□ -1.74
SOX2P48431 Y_RNA.6-201ENST00000362350 114 ntBASIC4.2□□□□□ -1.74
SOX2P48431 RNA5SP132-201ENST00000364725 118 ntBASIC4.2□□□□□ -1.74
SOX2P48431 U8.14-201ENST00000390843 143 ntBASIC4.2□□□□□ -1.74
SOX2P48431 EIF5P1-201ENST00000400019 1231 ntBASIC4.2□□□□□ -1.74
SOX2P48431 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.2□□□□□ -1.74
SOX2P48431 RNU2-66P-201ENST00000410650 161 ntBASIC4.2□□□□□ -1.74
SOX2P48431 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.2□□□□□ -1.74
SOX2P48431 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.2□□□□□ -1.74
SOX2P48431 OFD1P18Y-201ENST00000420889 959 ntBASIC4.2□□□□□ -1.74
SOX2P48431 DDX39BP1-205ENST00000422507 192 ntBASIC4.2□□□□□ -1.74
SOX2P48431 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.2□□□□□ -1.74
SOX2P48431 COX6CP15-201ENST00000426313 211 ntBASIC4.2□□□□□ -1.74
SOX2P48431 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.2□□□□□ -1.74
SOX2P48431 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.2□□□□□ -1.74
SOX2P48431 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.2□□□□□ -1.74
SOX2P48431 OR2B8P-201ENST00000432841 938 ntBASIC4.2□□□□□ -1.74
SOX2P48431 AL451139.1-201ENST00000434718 346 ntBASIC4.2□□□□□ -1.74
SOX2P48431 OR52B5P-201ENST00000435337 951 ntBASIC4.2□□□□□ -1.74
SOX2P48431 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.2□□□□□ -1.74
SOX2P48431 MTCO2P3-201ENST00000442543 421 ntBASIC4.2□□□□□ -1.74
SOX2P48431 SPRYD7P1-201ENST00000443861 570 ntBASIC4.2□□□□□ -1.74
SOX2P48431 AL163193.1-201ENST00000444895 788 ntBASIC4.2□□□□□ -1.74
SOX2P48431 MTCO1P27-201ENST00000448269 226 ntBASIC4.2□□□□□ -1.74
SOX2P48431 AC011225.1-201ENST00000457751 369 ntBASIC4.2□□□□□ -1.74
SOX2P48431 OR9M1P-201ENST00000459641 921 ntBASIC4.2□□□□□ -1.74
SOX2P48431 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.2□□□□□ -1.74
SOX2P48431 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.2□□□□□ -1.74
SOX2P48431 AC097484.1-201ENST00000471148 389 ntBASIC4.2□□□□□ -1.74
SOX2P48431 AC010683.1-201ENST00000473673 378 ntBASIC4.2□□□□□ -1.74
SOX2P48431 MTND6P6-201ENST00000478031 263 ntBASIC4.2□□□□□ -1.74
SOX2P48431 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SOX2P48431 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.2□□□□□ -1.74
SOX2P48431 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.2□□□□□ -1.74
SOX2P48431 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.2□□□□□ -1.74
SOX2P48431 AC104986.1-201ENST00000517978 436 ntBASIC4.2□□□□□ -1.74
SOX2P48431 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.2□□□□□ -1.74
SOX2P48431 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.2□□□□□ -1.74
SOX2P48431 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SOX2P48431 PCNPP1-201ENST00000552501 511 ntBASIC4.2□□□□□ -1.74
SOX2P48431 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.2□□□□□ -1.74
SOX2P48431 HMGB3P26-201ENST00000560051 582 ntBASIC4.2□□□□□ -1.74
SOX2P48431 AC093249.4-201ENST00000564755 259 ntBASIC4.2□□□□□ -1.74
SOX2P48431 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.2□□□□□ -1.74
SOX2P48431 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.2□□□□□ -1.74
SOX2P48431 AC090186.1-201ENST00000605991 572 ntBASIC4.2□□□□□ -1.74
SOX2P48431 AC126915.2-201ENST00000610957 190 ntBASIC4.2□□□□□ -1.74
SOX2P48431 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.2□□□□□ -1.74
SOX2P48431 AL357080.1-201ENST00000617394 239 ntBASIC4.2□□□□□ -1.74
SOX2P48431 AC005086.4-201ENST00000623065 213 ntBASIC4.2□□□□□ -1.74
SOX2P48431 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.2□□□□□ -1.74
SOX2P48431 HSPA8P18-201ENST00000439846 1928 ntBASIC4.2□□□□□ -1.74
SOX2P48431 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SOX2P48431 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.2□□□□□ -1.74
SOX2P48431 AL031119.1-201ENST00000404707 1879 ntBASIC4.2□□□□□ -1.74
SOX2P48431 GDI2P1-201ENST00000429312 1336 ntBASIC4.2□□□□□ -1.74
SOX2P48431 DCAF13P1-201ENST00000495256 1330 ntBASIC4.2□□□□□ -1.74
SOX2P48431 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.2□□□□□ -1.74
SOX2P48431 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SOX2P48431 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
SOX2P48431 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SOX2P48431 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SOX2P48431 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SOX2P48431 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SOX2P48431 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SOX2P48431 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SOX2P48431 RPL23AP57-201ENST00000332361 466 ntBASIC4.19□□□□□ -1.74
SOX2P48431 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SOX2P48431 RNU6-348P-201ENST00000384386 107 ntBASIC4.19□□□□□ -1.74
SOX2P48431 SNORA17A-201ENST00000391185 133 ntBASIC4.19□□□□□ -1.74
SOX2P48431 ARF4P3-201ENST00000397387 509 ntBASIC4.19□□□□□ -1.74
SOX2P48431 RN7SKP266-201ENST00000410232 287 ntBASIC4.19□□□□□ -1.74
SOX2P48431 RN7SKP33-201ENST00000410942 340 ntBASIC4.19□□□□□ -1.74
SOX2P48431 AC069218.2-201ENST00000411665 344 ntBASIC4.19□□□□□ -1.74
SOX2P48431 OR8G2P-201ENST00000412796 908 ntBASIC4.19□□□□□ -1.74
SOX2P48431 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.19□□□□□ -1.74
SOX2P48431 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.19□□□□□ -1.74
SOX2P48431 AC010975.2-201ENST00000427781 588 ntBASIC4.19□□□□□ -1.74
SOX2P48431 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.19□□□□□ -1.74
SOX2P48431 AL353597.2-202ENST00000434901 373 ntBASIC4.19□□□□□ -1.74
SOX2P48431 MTND1P4-201ENST00000435196 415 ntBASIC4.19□□□□□ -1.74
SOX2P48431 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.19□□□□□ -1.74
SOX2P48431 RPL23AP74-201ENST00000437246 471 ntBASIC4.19□□□□□ -1.74
SOX2P48431 LSM1P1-201ENST00000438629 273 ntBASIC4.19□□□□□ -1.74
SOX2P48431 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.19□□□□□ -1.74
SOX2P48431 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.19□□□□□ -1.74
SOX2P48431 EIF4A1P11-201ENST00000451239 222 ntBASIC4.19□□□□□ -1.74
SOX2P48431 AC144530.1-201ENST00000452862 555 ntBASIC4.19□□□□□ -1.74
SOX2P48431 snoU13.7-201ENST00000459220 104 ntBASIC4.19□□□□□ -1.74
SOX2P48431 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SOX2P48431 OR2AO1P-201ENST00000476497 403 ntBASIC4.19□□□□□ -1.74
SOX2P48431 AC096751.1-202ENST00000502691 1067 ntBASIC4.19□□□□□ -1.74
SOX2P48431 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.19□□□□□ -1.74
SOX2P48431 PGBD4P4-201ENST00000509673 613 ntBASIC4.19□□□□□ -1.74
SOX2P48431 AF131216.2-201ENST00000512316 564 ntBASIC4.19□□□□□ -1.74
SOX2P48431 RN7SKP298-201ENST00000515950 94 ntBASIC4.19□□□□□ -1.74
SOX2P48431 HSPA8P13-201ENST00000523715 472 ntBASIC4.19□□□□□ -1.74
SOX2P48431 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.19□□□□□ -1.74
SOX2P48431 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.19□□□□□ -1.74
SOX2P48431 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms