Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LTBRP36941 Y_RNA.11-201ENST00000362375 109 ntBASIC5.31□□□□□ -1.56
LTBRP36941 RNA5SP388-201ENST00000362584 119 ntBASIC5.31□□□□□ -1.56
LTBRP36941 RNU6-343P-201ENST00000364709 104 ntBASIC5.31□□□□□ -1.56
LTBRP36941 AC245054.1-201ENST00000420944 258 ntBASIC5.31□□□□□ -1.56
LTBRP36941 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.31□□□□□ -1.56
LTBRP36941 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.31□□□□□ -1.56
LTBRP36941 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.31□□□□□ -1.56
LTBRP36941 RPL23AP1-201ENST00000428990 471 ntBASIC5.31□□□□□ -1.56
LTBRP36941 AC133104.1-201ENST00000429100 218 ntBASIC5.31□□□□□ -1.56
LTBRP36941 MTCO2P11-201ENST00000431069 680 ntBASIC5.31□□□□□ -1.56
LTBRP36941 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.31□□□□□ -1.56
LTBRP36941 FAM103A2P-201ENST00000444122 354 ntBASIC5.31□□□□□ -1.56
LTBRP36941 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.31□□□□□ -1.56
LTBRP36941 AC087312.1-201ENST00000471411 480 ntBASIC5.31□□□□□ -1.56
LTBRP36941 AP000893.1-201ENST00000474462 794 ntBASIC5.31□□□□□ -1.56
LTBRP36941 RPL35P6-201ENST00000490024 372 ntBASIC5.31□□□□□ -1.56
LTBRP36941 AP001025.2-201ENST00000490908 477 ntBASIC5.31□□□□□ -1.56
LTBRP36941 RPSAP51-201ENST00000497462 645 ntBASIC5.31□□□□□ -1.56
LTBRP36941 AC010350.1-201ENST00000504908 231 ntBASIC5.31□□□□□ -1.56
LTBRP36941 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.31□□□□□ -1.56
LTBRP36941 Y_RNA.693-201ENST00000516641 110 ntBASIC5.31□□□□□ -1.56
LTBRP36941 AP000859.1-201ENST00000525536 307 ntBASIC5.31□□□□□ -1.56
LTBRP36941 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.31□□□□□ -1.56
LTBRP36941 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.31□□□□□ -1.56
LTBRP36941 AC009962.1-201ENST00000567327 3813 ntBASIC5.31□□□□□ -1.56
LTBRP36941 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.31□□□□□ -1.56
LTBRP36941 MIR4504-201ENST00000577413 92 ntBASIC5.31□□□□□ -1.56
LTBRP36941 AC090616.5-202ENST00000582111 297 ntBASIC5.31□□□□□ -1.56
LTBRP36941 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.31□□□□□ -1.56
LTBRP36941 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.31□□□□□ -1.56
LTBRP36941 AC012507.3-201ENST00000603556 477 ntBASIC5.31□□□□□ -1.56
LTBRP36941 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.31□□□□□ -1.56
LTBRP36941 AC010149.2-201ENST00000637608 315 ntBASIC5.31□□□□□ -1.56
LTBRP36941 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
LTBRP36941 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.31□□□□□ -1.56
LTBRP36941 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.31□□□□□ -1.56
LTBRP36941 AC020656.2-201ENST00000613291 5309 ntBASIC5.31□□□□□ -1.56
LTBRP36941 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
LTBRP36941 AP000432.2-201ENST00000624164 2048 ntBASIC5.31□□□□□ -1.56
LTBRP36941 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
LTBRP36941 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LTBRP36941 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LTBRP36941 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
LTBRP36941 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
LTBRP36941 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
LTBRP36941 HSPD1P8-201ENST00000400121 1658 ntBASIC5.31□□□□□ -1.56
LTBRP36941 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.31□□□□□ -1.56
LTBRP36941 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
LTBRP36941 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LTBRP36941 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
LTBRP36941 AC100757.1-201ENST00000616872 1835 ntBASIC5.3□□□□□ -1.56
LTBRP36941 AL049780.3-201ENST00000624612 1583 ntBASIC5.3□□□□□ -1.56
LTBRP36941 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LTBRP36941 TTC41P-205ENST00000551270 3963 ntBASIC5.3□□□□□ -1.56
LTBRP36941 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LTBRP36941 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LTBRP36941 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
LTBRP36941 AC099654.2-201ENST00000433031 1980 ntBASIC5.3□□□□□ -1.56
LTBRP36941 CBX3P1-201ENST00000325243 554 ntBASIC5.3□□□□□ -1.56
LTBRP36941 RNU6-853P-201ENST00000364306 107 ntBASIC5.3□□□□□ -1.56
LTBRP36941 RNU6-877P-201ENST00000383868 107 ntBASIC5.3□□□□□ -1.56
LTBRP36941 RNU6-483P-201ENST00000384088 108 ntBASIC5.3□□□□□ -1.56
LTBRP36941 RNU1-74P-201ENST00000384108 171 ntBASIC5.3□□□□□ -1.56
LTBRP36941 SNORA70.9-201ENST00000384370 135 ntBASIC5.3□□□□□ -1.56
LTBRP36941 RPL7P58-201ENST00000402913 758 ntBASIC5.3□□□□□ -1.56
LTBRP36941 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LTBRP36941 PPIAP9-201ENST00000403866 498 ntBASIC5.3□□□□□ -1.56
LTBRP36941 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.3□□□□□ -1.56
LTBRP36941 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.3□□□□□ -1.56
LTBRP36941 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.3□□□□□ -1.56
LTBRP36941 AL592293.2-201ENST00000422292 996 ntBASIC5.3□□□□□ -1.56
LTBRP36941 AL732292.1-201ENST00000426692 226 ntBASIC5.3□□□□□ -1.56
LTBRP36941 AC005154.2-201ENST00000438110 379 ntBASIC5.3□□□□□ -1.56
LTBRP36941 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.3□□□□□ -1.56
LTBRP36941 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.3□□□□□ -1.56
LTBRP36941 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.3□□□□□ -1.56
LTBRP36941 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.3□□□□□ -1.56
LTBRP36941 LINC02210-201ENST00000444561 288 ntBASIC5.3□□□□□ -1.56
LTBRP36941 AL354714.3-201ENST00000447284 493 ntBASIC5.3□□□□□ -1.56
LTBRP36941 TPT1P14-201ENST00000448018 505 ntBASIC5.3□□□□□ -1.56
LTBRP36941 ELOCP23-201ENST00000452014 332 ntBASIC5.3□□□□□ -1.56
LTBRP36941 AURKAPS2-201ENST00000454983 333 ntBASIC5.3□□□□□ -1.56
LTBRP36941 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.3□□□□□ -1.56
LTBRP36941 AC034222.1-201ENST00000494052 532 ntBASIC5.3□□□□□ -1.56
LTBRP36941 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.3□□□□□ -1.56
LTBRP36941 AC083829.1-201ENST00000503756 657 ntBASIC5.3□□□□□ -1.56
LTBRP36941 AC114967.1-201ENST00000504890 259 ntBASIC5.3□□□□□ -1.56
LTBRP36941 AC025465.4-201ENST00000513422 638 ntBASIC5.3□□□□□ -1.56
LTBRP36941 RNU6-714P-201ENST00000516963 103 ntBASIC5.3□□□□□ -1.56
LTBRP36941 AC022616.6-201ENST00000520479 119 ntBASIC5.3□□□□□ -1.56
LTBRP36941 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.3□□□□□ -1.56
LTBRP36941 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.3□□□□□ -1.56
LTBRP36941 AL512310.1-201ENST00000548639 172 ntBASIC5.3□□□□□ -1.56
LTBRP36941 AC107954.1-201ENST00000565906 727 ntBASIC5.3□□□□□ -1.56
LTBRP36941 MIR3160-1-201ENST00000577972 85 ntBASIC5.3□□□□□ -1.56
LTBRP36941 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.3□□□□□ -1.56
LTBRP36941 AC060780.3-201ENST00000589464 80 ntBASIC5.3□□□□□ -1.56
LTBRP36941 AL391646.1-201ENST00000603860 190 ntBASIC5.3□□□□□ -1.56
LTBRP36941 MIR98-201ENST00000606724 119 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms