Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC6A4P31645 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SLC6A4P31645 AC090502.2-201ENST00000549267 280 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.88□□□□□ -1.63
SLC6A4P31645 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.88□□□□□ -1.63
SLC6A4P31645 AC087477.6-201ENST00000559595 843 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC6A4P31645 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.88□□□□□ -1.63
SLC6A4P31645 MIR3936-201ENST00000584304 110 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 AC108747.1-201ENST00000609508 535 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC6A4P31645 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC6A4P31645 XPOTP1-201ENST00000443317 2398 ntBASIC4.88□□□□□ -1.63
SLC6A4P31645 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SLC6A4P31645 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC6A4P31645 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC6A4P31645 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC6A4P31645 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
SLC6A4P31645 AC025574.1-201ENST00000554784 1653 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SLC6A4P31645 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC6A4P31645 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC6A4P31645 AC016716.1-201ENST00000265882 708 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 OR4A15-201ENST00000314706 1035 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 AL590762.2-201ENST00000395798 571 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 AL049697.2-201ENST00000403708 294 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC6A4P31645 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC6A4P31645 PRELID3BP11-201ENST00000414230 479 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 COX6CP17-201ENST00000421389 185 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SLC6A4P31645 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC6A4P31645 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 AL158073.1-201ENST00000426848 1104 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC6A4P31645 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC6A4P31645 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC6A4P31645 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC6A4P31645 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC6A4P31645 SNRPEP7-201ENST00000438350 220 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC6A4P31645 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC6A4P31645 RN7SL459P-201ENST00000481078 302 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 RPL9P33-201ENST00000484311 566 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC6A4P31645 OR4G11P-201ENST00000492842 939 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 RPL7P24-201ENST00000493052 752 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 AC096751.1-202ENST00000502691 1067 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 AC026412.2-201ENST00000512270 1075 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 AC006499.2-201ENST00000513470 337 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 MTND5P4-201ENST00000514978 288 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC6A4P31645 RN7SKP298-201ENST00000515950 94 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC6A4P31645 AP002453.2-201ENST00000533503 320 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC6A4P31645 AC090515.3-201ENST00000560431 315 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 AC091489.2-201ENST00000566263 604 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 MIR5186-201ENST00000577504 120 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 RN7SL652P-201ENST00000577769 300 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC6A4P31645 AC008745.1-201ENST00000604064 271 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 AC115286.1-201ENST00000604298 434 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 AC068944.2-201ENST00000610373 403 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 AL589743.7-201ENST00000612637 233 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 AC026368.1-201ENST00000614934 690 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC6A4P31645 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC6A4P31645 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC6A4P31645 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SLC6A4P31645 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SLC6A4P31645 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC6A4P31645 AL445437.1-201ENST00000623157 3087 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SLC6A4P31645 TEX21P-201ENST00000447107 1476 ntBASIC4.87□□□□□ -1.63
SLC6A4P31645 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC6A4P31645 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC6A4P31645 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC6A4P31645 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC6A4P31645 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC6A4P31645 PCAT14-202ENST00000627127 3935 ntBASIC4.86□□□□□ -1.63
SLC6A4P31645 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC6A4P31645 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC6A4P31645 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC6A4P31645 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
SLC6A4P31645 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC6A4P31645 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC6A4P31645 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.86□□□□□ -1.63
SLC6A4P31645 RPS24P12-201ENST00000402084 394 ntBASIC4.86□□□□□ -1.63
SLC6A4P31645 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC6A4P31645 U3.35-201ENST00000408405 208 ntBASIC4.86□□□□□ -1.63
SLC6A4P31645 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC6A4P31645 AC119751.6-201ENST00000416712 186 ntBASIC4.86□□□□□ -1.63
SLC6A4P31645 AC140479.3-201ENST00000418944 1126 ntBASIC4.86□□□□□ -1.63
SLC6A4P31645 RPL7P57-201ENST00000423238 740 ntBASIC4.86□□□□□ -1.63
SLC6A4P31645 EIF4HP2-201ENST00000424380 563 ntBASIC4.86□□□□□ -1.63
SLC6A4P31645 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC6A4P31645 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC6A4P31645 C4BPAP2-201ENST00000428434 478 ntBASIC4.86□□□□□ -1.63
SLC6A4P31645 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms