Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 ARL5AP4-201ENST00000430731 512 ntBASIC3.55□□□□□ -1.84
COL4A5P29400 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.55□□□□□ -1.84
COL4A5P29400 SYT14P1-201ENST00000481459 721 ntBASIC3.55□□□□□ -1.84
COL4A5P29400 SETP12-201ENST00000514068 805 ntBASIC3.55□□□□□ -1.84
COL4A5P29400 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.55□□□□□ -1.84
COL4A5P29400 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
COL4A5P29400 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.55□□□□□ -1.84
COL4A5P29400 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL4A5P29400 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL4A5P29400 RNU1-112P-201ENST00000364401 164 ntBASIC3.55□□□□□ -1.84
COL4A5P29400 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL4A5P29400 AL360182.1-201ENST00000397433 468 ntBASIC3.55□□□□□ -1.84
COL4A5P29400 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.55□□□□□ -1.84
COL4A5P29400 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.55□□□□□ -1.84
COL4A5P29400 AP001207.2-201ENST00000519490 539 ntBASIC3.55□□□□□ -1.84
COL4A5P29400 AC096947.1-201ENST00000603233 470 ntBASIC3.55□□□□□ -1.84
COL4A5P29400 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.55□□□□□ -1.84
COL4A5P29400 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL4A5P29400 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
COL4A5P29400 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
COL4A5P29400 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL4A5P29400 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL4A5P29400 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
COL4A5P29400 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL4A5P29400 RNU6-304P-201ENST00000364855 107 ntBASIC3.54□□□□□ -1.84
COL4A5P29400 SRIP2-201ENST00000428470 166 ntBASIC3.54□□□□□ -1.84
COL4A5P29400 AC073508.1-201ENST00000428866 656 ntBASIC3.54□□□□□ -1.84
COL4A5P29400 NIPA2P5-201ENST00000452282 464 ntBASIC3.54□□□□□ -1.84
COL4A5P29400 MTCO3P20-201ENST00000454926 688 ntBASIC3.54□□□□□ -1.84
COL4A5P29400 Y_RNA.676-201ENST00000516393 96 ntBASIC3.54□□□□□ -1.84
COL4A5P29400 AC009097.3-201ENST00000563557 1018 ntBASIC3.54□□□□□ -1.84
COL4A5P29400 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.54□□□□□ -1.84
COL4A5P29400 MIR4435-1-201ENST00000582552 80 ntBASIC3.54□□□□□ -1.84
COL4A5P29400 AC124856.1-201ENST00000600819 896 ntBASIC3.54□□□□□ -1.84
COL4A5P29400 AP004607.9-201ENST00000618202 316 ntBASIC3.54□□□□□ -1.84
COL4A5P29400 AC022509.4-201ENST00000621404 572 ntBASIC3.54□□□□□ -1.84
COL4A5P29400 AC103858.2-201ENST00000621471 543 ntBASIC3.54□□□□□ -1.84
COL4A5P29400 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.54□□□□□ -1.84
COL4A5P29400 AC244205.2-202ENST00000635781 342 ntBASIC3.54□□□□□ -1.84
COL4A5P29400 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC3.54□□□□□ -1.84
COL4A5P29400 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL4A5P29400 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
COL4A5P29400 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL4A5P29400 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.53□□□□□ -1.84
COL4A5P29400 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL4A5P29400 SNORA9.2-201ENST00000365361 133 ntBASIC3.53□□□□□ -1.84
COL4A5P29400 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL4A5P29400 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.53□□□□□ -1.84
COL4A5P29400 AC003685.2-201ENST00000422795 395 ntBASIC3.53□□□□□ -1.84
COL4A5P29400 TRBV12-1-201ENST00000479785 344 ntBASIC3.53□□□□□ -1.84
COL4A5P29400 SCGB1D5P-201ENST00000515134 247 ntBASIC3.53□□□□□ -1.84
COL4A5P29400 MIR4524B-201ENST00000581569 115 ntBASIC3.53□□□□□ -1.84
COL4A5P29400 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.53□□□□□ -1.84
COL4A5P29400 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
COL4A5P29400 XKRY2-202ENST00000623874 1581 ntBASIC3.53□□□□□ -1.84
COL4A5P29400 XKRY-202ENST00000624960 1581 ntBASIC3.53□□□□□ -1.84
COL4A5P29400 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL4A5P29400 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
COL4A5P29400 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
COL4A5P29400 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL4A5P29400 FAM35DP-201ENST00000323387 2712 ntBASIC3.53□□□□□ -1.84
COL4A5P29400 HSPA8P1-201ENST00000425843 1833 ntBASIC3.53□□□□□ -1.85
COL4A5P29400 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.53□□□□□ -1.85
COL4A5P29400 RNU6-859P-201ENST00000362728 107 ntBASIC3.52□□□□□ -1.85
COL4A5P29400 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
COL4A5P29400 NPM1P11-201ENST00000417106 855 ntBASIC3.52□□□□□ -1.85
COL4A5P29400 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.52□□□□□ -1.85
COL4A5P29400 AC017037.2-201ENST00000513850 890 ntBASIC3.52□□□□□ -1.85
COL4A5P29400 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.52□□□□□ -1.85
COL4A5P29400 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.52□□□□□ -1.85
COL4A5P29400 HMGB1P50-201ENST00000605814 607 ntBASIC3.52□□□□□ -1.85
COL4A5P29400 AL359715.5-201ENST00000623431 443 ntBASIC3.52□□□□□ -1.85
COL4A5P29400 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.52□□□□□ -1.85
COL4A5P29400 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.52□□□□□ -1.85
COL4A5P29400 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
COL4A5P29400 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
COL4A5P29400 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC3.52□□□□□ -1.85
COL4A5P29400 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.52□□□□□ -1.85
COL4A5P29400 RAB28P3-201ENST00000448325 597 ntBASIC3.52□□□□□ -1.85
COL4A5P29400 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.52□□□□□ -1.85
COL4A5P29400 AC114967.1-201ENST00000504890 259 ntBASIC3.52□□□□□ -1.85
COL4A5P29400 RNU6-964P-201ENST00000516524 69 ntBASIC3.52□□□□□ -1.85
COL4A5P29400 AC109329.2-201ENST00000519658 482 ntBASIC3.52□□□□□ -1.85
COL4A5P29400 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.52□□□□□ -1.85
COL4A5P29400 AC079089.3-201ENST00000603094 673 ntBASIC3.52□□□□□ -1.85
COL4A5P29400 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
COL4A5P29400 AL353684.1-201ENST00000622677 1120 ntBASIC3.52□□□□□ -1.85
COL4A5P29400 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.52□□□□□ -1.85
COL4A5P29400 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL4A5P29400 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.51□□□□□ -1.85
COL4A5P29400 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
COL4A5P29400 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
COL4A5P29400 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
COL4A5P29400 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.51□□□□□ -1.85
COL4A5P29400 ZNF603P-201ENST00000405613 487 ntBASIC3.51□□□□□ -1.85
COL4A5P29400 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.51□□□□□ -1.85
COL4A5P29400 UBL5P3-201ENST00000475112 231 ntBASIC3.51□□□□□ -1.85
COL4A5P29400 AC111000.2-201ENST00000507775 550 ntBASIC3.51□□□□□ -1.85
COL4A5P29400 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.51□□□□□ -1.85
COL4A5P29400 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms