Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH3P22223 AC105402.2-201ENST00000438503 358 ntBASIC4.05□□□□□ -1.76
CDH3P22223 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH3P22223 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH3P22223 NPM1P13-201ENST00000452663 865 ntBASIC4.05□□□□□ -1.76
CDH3P22223 OFD1P3Y-201ENST00000453312 783 ntBASIC4.05□□□□□ -1.76
CDH3P22223 ANP32BP2-201ENST00000454525 545 ntBASIC4.05□□□□□ -1.76
CDH3P22223 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH3P22223 CEACAMP4-201ENST00000457676 421 ntBASIC4.05□□□□□ -1.76
CDH3P22223 RPL9P32-201ENST00000464118 620 ntBASIC4.05□□□□□ -1.76
CDH3P22223 MTCO3P35-201ENST00000485582 781 ntBASIC4.05□□□□□ -1.76
CDH3P22223 AC104164.2-201ENST00000496953 495 ntBASIC4.05□□□□□ -1.76
CDH3P22223 AC020699.1-201ENST00000505161 445 ntBASIC4.05□□□□□ -1.76
CDH3P22223 AC008885.2-201ENST00000509506 930 ntBASIC4.05□□□□□ -1.76
CDH3P22223 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.05□□□□□ -1.76
CDH3P22223 RN7SKP21-201ENST00000516503 220 ntBASIC4.05□□□□□ -1.76
CDH3P22223 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.05□□□□□ -1.76
CDH3P22223 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH3P22223 AC023632.1-201ENST00000518463 375 ntBASIC4.05□□□□□ -1.76
CDH3P22223 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH3P22223 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH3P22223 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDH3P22223 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH3P22223 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH3P22223 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH3P22223 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.05□□□□□ -1.76
CDH3P22223 AC091515.1-201ENST00000548110 679 ntBASIC4.05□□□□□ -1.76
CDH3P22223 AC004217.3-201ENST00000551552 878 ntBASIC4.05□□□□□ -1.76
CDH3P22223 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH3P22223 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.05□□□□□ -1.76
CDH3P22223 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH3P22223 AC044913.1-201ENST00000557200 430 ntBASIC4.05□□□□□ -1.76
CDH3P22223 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.05□□□□□ -1.76
CDH3P22223 AC009101.1-201ENST00000568135 242 ntBASIC4.05□□□□□ -1.76
CDH3P22223 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH3P22223 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH3P22223 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH3P22223 AL035411.2-201ENST00000604022 421 ntBASIC4.05□□□□□ -1.76
CDH3P22223 AL138478.1-201ENST00000612252 832 ntBASIC4.05□□□□□ -1.76
CDH3P22223 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH3P22223 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.05□□□□□ -1.76
CDH3P22223 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH3P22223 AC109454.4-201ENST00000623411 649 ntBASIC4.05□□□□□ -1.76
CDH3P22223 AC006065.5-201ENST00000623427 349 ntBASIC4.05□□□□□ -1.76
CDH3P22223 AC006963.1-201ENST00000624003 1052 ntBASIC4.05□□□□□ -1.76
CDH3P22223 AC112484.5-201ENST00000624189 228 ntBASIC4.05□□□□□ -1.76
CDH3P22223 AP001002.2-201ENST00000625137 386 ntBASIC4.05□□□□□ -1.76
CDH3P22223 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH3P22223 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.05□□□□□ -1.76
CDH3P22223 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH3P22223 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDH3P22223 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CDH3P22223 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDH3P22223 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH3P22223 RNA5SP479-201ENST00000364858 117 ntBASIC4.04□□□□□ -1.76
CDH3P22223 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
CDH3P22223 SNORA51.12-201ENST00000384448 134 ntBASIC4.04□□□□□ -1.76
CDH3P22223 ANAPC10P1-201ENST00000395991 556 ntBASIC4.04□□□□□ -1.76
CDH3P22223 MTCO2P31-201ENST00000402702 684 ntBASIC4.04□□□□□ -1.76
CDH3P22223 AL079342.2-201ENST00000403367 482 ntBASIC4.04□□□□□ -1.76
CDH3P22223 Z98941.1-201ENST00000407764 100 ntBASIC4.04□□□□□ -1.76
CDH3P22223 MIR1193-201ENST00000408109 78 ntBASIC4.04□□□□□ -1.76
CDH3P22223 RNA5SP317-201ENST00000410176 116 ntBASIC4.04□□□□□ -1.76
CDH3P22223 RN7SKP263-201ENST00000411194 309 ntBASIC4.04□□□□□ -1.76
CDH3P22223 RNA5SP311-201ENST00000411290 116 ntBASIC4.04□□□□□ -1.76
CDH3P22223 RHEBP3-201ENST00000411920 351 ntBASIC4.04□□□□□ -1.76
CDH3P22223 RPS3AP37-201ENST00000419176 745 ntBASIC4.04□□□□□ -1.76
CDH3P22223 HIGD1AP12-201ENST00000427832 281 ntBASIC4.04□□□□□ -1.76
CDH3P22223 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH3P22223 RPS26P40-201ENST00000435209 294 ntBASIC4.04□□□□□ -1.76
CDH3P22223 AL138799.3-201ENST00000438968 350 ntBASIC4.04□□□□□ -1.76
CDH3P22223 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH3P22223 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.04□□□□□ -1.76
CDH3P22223 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH3P22223 AC112492.1-201ENST00000449607 712 ntBASIC4.04□□□□□ -1.76
CDH3P22223 ABCF2P2-201ENST00000450549 296 ntBASIC4.04□□□□□ -1.76
CDH3P22223 ZNF886P-201ENST00000450781 723 ntBASIC4.04□□□□□ -1.76
CDH3P22223 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH3P22223 MRPL42P4-201ENST00000453267 443 ntBASIC4.04□□□□□ -1.76
CDH3P22223 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH3P22223 AC092155.2-201ENST00000454675 477 ntBASIC4.04□□□□□ -1.76
CDH3P22223 TMED11P-201ENST00000479478 690 ntBASIC4.04□□□□□ -1.76
CDH3P22223 AC017037.1-201ENST00000508460 471 ntBASIC4.04□□□□□ -1.76
CDH3P22223 AC118282.2-201ENST00000508739 374 ntBASIC4.04□□□□□ -1.76
CDH3P22223 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH3P22223 RNA5SP315-201ENST00000516340 116 ntBASIC4.04□□□□□ -1.76
CDH3P22223 RNA5SP312-201ENST00000517068 116 ntBASIC4.04□□□□□ -1.76
CDH3P22223 AC008802.1-201ENST00000519121 791 ntBASIC4.04□□□□□ -1.76
CDH3P22223 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.04□□□□□ -1.76
CDH3P22223 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH3P22223 OR8K4P-201ENST00000534608 872 ntBASIC4.04□□□□□ -1.76
CDH3P22223 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH3P22223 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.04□□□□□ -1.76
CDH3P22223 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.04□□□□□ -1.76
CDH3P22223 AGGF1P6-201ENST00000569213 976 ntBASIC4.04□□□□□ -1.76
CDH3P22223 AC022655.2-201ENST00000577280 318 ntBASIC4.04□□□□□ -1.76
CDH3P22223 BPTFP1-201ENST00000579209 492 ntBASIC4.04□□□□□ -1.76
CDH3P22223 AL020997.2-201ENST00000602607 184 ntBASIC4.04□□□□□ -1.76
CDH3P22223 AL445435.1-201ENST00000604232 665 ntBASIC4.04□□□□□ -1.76
CDH3P22223 AC013244.3-201ENST00000605614 388 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms