Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
COL6A2P12110 RNU6-761P-201ENST00000384148 107 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL6A2P12110 RPS20P2-201ENST00000402520 389 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 AL023807.1-201ENST00000407932 359 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.21□□□□□ -1.58
COL6A2P12110 OR6E1P-201ENST00000414424 923 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 MTCO1P20-201ENST00000425366 358 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5.21□□□□□ -1.58
COL6A2P12110 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 ISCA1P6-201ENST00000427740 390 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.21□□□□□ -1.58
COL6A2P12110 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.21□□□□□ -1.58
COL6A2P12110 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.21□□□□□ -1.58
COL6A2P12110 AC132479.1-201ENST00000449160 144 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 AC243772.1-201ENST00000451620 410 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 C1DP4-201ENST00000455429 424 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 SETP20-201ENST00000457046 852 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.21□□□□□ -1.58
COL6A2P12110 AC006511.1-201ENST00000470614 315 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 AC104563.1-201ENST00000476147 376 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 STMN1P2-201ENST00000508435 439 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.21□□□□□ -1.58
COL6A2P12110 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.21□□□□□ -1.58
COL6A2P12110 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.21□□□□□ -1.58
COL6A2P12110 Y_RNA.672-201ENST00000516289 104 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 Y_RNA.693-201ENST00000516641 110 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.21□□□□□ -1.58
COL6A2P12110 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.21□□□□□ -1.58
COL6A2P12110 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.21□□□□□ -1.58
COL6A2P12110 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.21□□□□□ -1.58
COL6A2P12110 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL6A2P12110 AC090616.5-202ENST00000582111 297 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.21□□□□□ -1.58
COL6A2P12110 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.21□□□□□ -1.58
COL6A2P12110 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.21□□□□□ -1.58
COL6A2P12110 C8orf59P2-201ENST00000603441 271 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 AC090948.2-201ENST00000607363 564 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.21□□□□□ -1.58
COL6A2P12110 AC068722.2-201ENST00000618734 544 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.21□□□□□ -1.58
COL6A2P12110 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.21□□□□□ -1.58
COL6A2P12110 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
COL6A2P12110 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL6A2P12110 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL6A2P12110 AL031595.2-201ENST00000624215 19071 ntBASIC5.21□□□□□ -1.58
COL6A2P12110 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.21□□□□□ -1.58
COL6A2P12110 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL6A2P12110 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL6A2P12110 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL6A2P12110 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL6A2P12110 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL6A2P12110 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL6A2P12110 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
COL6A2P12110 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
COL6A2P12110 AL450326.2-201ENST00000421913 1962 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 MUC2-202ENST00000613187 4845 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL6A2P12110 AC107027.3-201ENST00000565095 3473 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL6A2P12110 AC138915.3-201ENST00000562908 1389 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 CASC19-280ENST00000642102 1351 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
COL6A2P12110 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.2□□□□□ -1.58
COL6A2P12110 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL6A2P12110 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.2□□□□□ -1.58
COL6A2P12110 CBX3P1-201ENST00000325243 554 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 Y_RNA.38-201ENST00000362617 102 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 RNU6-181P-201ENST00000363225 107 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 RNU6-1090P-201ENST00000364065 94 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 Y_RNA.295-201ENST00000364918 102 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL6A2P12110 RPL7P25-201ENST00000404151 721 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 AL133388.1-201ENST00000404509 287 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.2□□□□□ -1.58
COL6A2P12110 SDHDP6-201ENST00000414693 480 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 MTND3P17-201ENST00000416968 344 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 AC009965.2-201ENST00000425328 970 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 AC096632.1-201ENST00000427395 310 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 FCF1P1-201ENST00000432690 571 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 AC002486.1-201ENST00000435098 391 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 SUMO2P3-201ENST00000438311 288 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.2□□□□□ -1.58
COL6A2P12110 RPS11P7-201ENST00000442125 465 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.2□□□□□ -1.58
COL6A2P12110 FABP3P2-201ENST00000453169 399 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.2□□□□□ -1.58
COL6A2P12110 TRBV26-201ENST00000456572 344 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.2□□□□□ -1.58
COL6A2P12110 AP000852.1-201ENST00000472460 573 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 RN7SL273P-201ENST00000481561 299 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 RPS29P25-201ENST00000481709 171 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.2□□□□□ -1.58
COL6A2P12110 RPL35P6-201ENST00000490024 372 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 NIFKP7-201ENST00000503365 834 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 OR5M14P-201ENST00000506803 618 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 RNA5SP228-201ENST00000516232 133 ntBASIC5.2□□□□□ -1.58
COL6A2P12110 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.2□□□□□ -1.58
COL6A2P12110 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.2□□□□□ -1.58
COL6A2P12110 AL845331.3-202ENST00000562856 261 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms