Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.3□□□□□ -1.72
PCNAP12004 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.3□□□□□ -1.72
PCNAP12004 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.3□□□□□ -1.72
PCNAP12004 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.3□□□□□ -1.72
PCNAP12004 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.3□□□□□ -1.72
PCNAP12004 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.3□□□□□ -1.72
PCNAP12004 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCNAP12004 MTCYBP27-201ENST00000555160 670 ntBASIC4.3□□□□□ -1.72
PCNAP12004 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.3□□□□□ -1.72
PCNAP12004 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.3□□□□□ -1.72
PCNAP12004 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.3□□□□□ -1.72
PCNAP12004 VN1R82P-201ENST00000601481 356 ntBASIC4.3□□□□□ -1.72
PCNAP12004 AC013444.2-201ENST00000603317 787 ntBASIC4.3□□□□□ -1.72
PCNAP12004 AL139395.1-201ENST00000603662 160 ntBASIC4.3□□□□□ -1.72
PCNAP12004 AC009220.3-201ENST00000604318 586 ntBASIC4.3□□□□□ -1.72
PCNAP12004 AL359535.1-201ENST00000612100 1087 ntBASIC4.3□□□□□ -1.72
PCNAP12004 AC093783.1-201ENST00000612976 329 ntBASIC4.3□□□□□ -1.72
PCNAP12004 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.3□□□□□ -1.72
PCNAP12004 MIR4727-201ENST00000622232 55 ntBASIC4.3□□□□□ -1.72
PCNAP12004 AC006065.6-201ENST00000625201 545 ntBASIC4.3□□□□□ -1.72
PCNAP12004 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.3□□□□□ -1.72
PCNAP12004 AC103706.2-201ENST00000638080 240 ntBASIC4.3□□□□□ -1.72
PCNAP12004 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.3□□□□□ -1.72
PCNAP12004 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCNAP12004 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCNAP12004 MFSD8-242ENST00000641690 4199 ntBASIC4.3□□□□□ -1.72
PCNAP12004 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCNAP12004 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCNAP12004 AC005539.1-201ENST00000443768 1479 ntBASIC4.3□□□□□ -1.72
PCNAP12004 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCNAP12004 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCNAP12004 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.29□□□□□ -1.72
PCNAP12004 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCNAP12004 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.29□□□□□ -1.72
PCNAP12004 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCNAP12004 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.29□□□□□ -1.72
PCNAP12004 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCNAP12004 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCNAP12004 OR4A15-201ENST00000314706 1035 ntBASIC4.29□□□□□ -1.72
PCNAP12004 RNU1-85P-201ENST00000364127 164 ntBASIC4.29□□□□□ -1.72
PCNAP12004 RNU6-621P-201ENST00000364752 109 ntBASIC4.29□□□□□ -1.72
PCNAP12004 U3.15-201ENST00000365398 212 ntBASIC4.29□□□□□ -1.72
PCNAP12004 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCNAP12004 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
PCNAP12004 RNU6-921P-201ENST00000384361 107 ntBASIC4.29□□□□□ -1.72
PCNAP12004 AL450338.1-201ENST00000407987 512 ntBASIC4.29□□□□□ -1.72
PCNAP12004 RNU4-72P-201ENST00000410754 173 ntBASIC4.29□□□□□ -1.72
PCNAP12004 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.29□□□□□ -1.72
PCNAP12004 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.29□□□□□ -1.72
PCNAP12004 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.29□□□□□ -1.72
PCNAP12004 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.29□□□□□ -1.72
PCNAP12004 AC069213.2-201ENST00000420238 366 ntBASIC4.29□□□□□ -1.72
PCNAP12004 UQCRBP1-201ENST00000421129 336 ntBASIC4.29□□□□□ -1.72
PCNAP12004 LYPLA1P1-201ENST00000434514 622 ntBASIC4.29□□□□□ -1.72
PCNAP12004 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCNAP12004 AC073264.2-201ENST00000448886 166 ntBASIC4.29□□□□□ -1.72
PCNAP12004 AL451050.1-201ENST00000450126 415 ntBASIC4.29□□□□□ -1.72
PCNAP12004 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.29□□□□□ -1.72
PCNAP12004 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.29□□□□□ -1.72
PCNAP12004 AC013828.1-201ENST00000481845 158 ntBASIC4.29□□□□□ -1.72
PCNAP12004 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCNAP12004 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.29□□□□□ -1.72
PCNAP12004 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCNAP12004 MTCO1P30-201ENST00000515244 580 ntBASIC4.29□□□□□ -1.72
PCNAP12004 AC105185.1-201ENST00000518705 535 ntBASIC4.29□□□□□ -1.72
PCNAP12004 AC090151.1-201ENST00000520784 730 ntBASIC4.29□□□□□ -1.72
PCNAP12004 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.29□□□□□ -1.72
PCNAP12004 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCNAP12004 AC090502.2-201ENST00000549267 280 ntBASIC4.29□□□□□ -1.72
PCNAP12004 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.29□□□□□ -1.72
PCNAP12004 AL161713.1-201ENST00000555538 145 ntBASIC4.29□□□□□ -1.72
PCNAP12004 RN7SL690P-201ENST00000582087 240 ntBASIC4.29□□□□□ -1.72
PCNAP12004 AC008759.1-201ENST00000589783 983 ntBASIC4.29□□□□□ -1.72
PCNAP12004 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.29□□□□□ -1.72
PCNAP12004 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.29□□□□□ -1.72
PCNAP12004 AC113194.1-201ENST00000606037 500 ntBASIC4.29□□□□□ -1.72
PCNAP12004 Z98200.1-201ENST00000607298 470 ntBASIC4.29□□□□□ -1.72
PCNAP12004 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.29□□□□□ -1.72
PCNAP12004 AC007546.2-201ENST00000623996 360 ntBASIC4.29□□□□□ -1.72
PCNAP12004 AC009039.2-201ENST00000624524 529 ntBASIC4.29□□□□□ -1.72
PCNAP12004 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.29□□□□□ -1.72
PCNAP12004 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.29□□□□□ -1.72
PCNAP12004 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCNAP12004 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.29□□□□□ -1.72
PCNAP12004 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PCNAP12004 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
PCNAP12004 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCNAP12004 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCNAP12004 AC025031.4-201ENST00000621248 3271 ntBASIC4.28□□□□□ -1.72
PCNAP12004 RNA5SP52-201ENST00000362448 134 ntBASIC4.28□□□□□ -1.72
PCNAP12004 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.28□□□□□ -1.72
PCNAP12004 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCNAP12004 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PCNAP12004 SNORA70F-201ENST00000384142 135 ntBASIC4.28□□□□□ -1.72
PCNAP12004 RNU6-1200P-201ENST00000384162 107 ntBASIC4.28□□□□□ -1.72
PCNAP12004 RNU6-441P-201ENST00000384545 106 ntBASIC4.28□□□□□ -1.72
PCNAP12004 AL590084.2-201ENST00000401481 382 ntBASIC4.28□□□□□ -1.72
PCNAP12004 AL121978.1-201ENST00000402778 359 ntBASIC4.28□□□□□ -1.72
PCNAP12004 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCNAP12004 RNU2-21P-201ENST00000410368 188 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms