Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMGB1P09429 AC106871.1-201ENST00000568324 3102 ntBASIC5.54□□□□□ -1.52
HMGB1P09429 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB1P09429 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB1P09429 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB1P09429 AC125257.1-201ENST00000560400 2930 ntBASIC5.53□□□□□ -1.52
HMGB1P09429 MTND5P24-201ENST00000438892 1767 ntBASIC5.53□□□□□ -1.52
HMGB1P09429 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB1P09429 RNA5SP191-201ENST00000362585 102 ntBASIC5.53□□□□□ -1.52
HMGB1P09429 Z98745.1-201ENST00000402553 494 ntBASIC5.53□□□□□ -1.52
HMGB1P09429 VDAC1P9-201ENST00000412766 841 ntBASIC5.53□□□□□ -1.52
HMGB1P09429 AC119751.6-201ENST00000416712 186 ntBASIC5.53□□□□□ -1.52
HMGB1P09429 AC140479.3-201ENST00000418944 1126 ntBASIC5.53□□□□□ -1.52
HMGB1P09429 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGB1P09429 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.53□□□□□ -1.52
HMGB1P09429 AC005154.2-201ENST00000438110 379 ntBASIC5.53□□□□□ -1.52
HMGB1P09429 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGB1P09429 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB1P09429 WBP1LP4-201ENST00000505043 344 ntBASIC5.53□□□□□ -1.52
HMGB1P09429 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGB1P09429 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB1P09429 AL110118.1-201ENST00000553543 400 ntBASIC5.53□□□□□ -1.52
HMGB1P09429 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.53□□□□□ -1.52
HMGB1P09429 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.53□□□□□ -1.52
HMGB1P09429 MIR3934-201ENST00000579806 107 ntBASIC5.53□□□□□ -1.52
HMGB1P09429 AP001029.3-201ENST00000588063 596 ntBASIC5.53□□□□□ -1.52
HMGB1P09429 AC245884.10-201ENST00000597355 337 ntBASIC5.53□□□□□ -1.52
HMGB1P09429 VN1R78P-201ENST00000597393 564 ntBASIC5.53□□□□□ -1.52
HMGB1P09429 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.53□□□□□ -1.52
HMGB1P09429 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.53□□□□□ -1.52
HMGB1P09429 AC090510.2-201ENST00000617465 629 ntBASIC5.53□□□□□ -1.52
HMGB1P09429 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB1P09429 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB1P09429 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
HMGB1P09429 MAPK10-372ENST00000641954 3413 ntBASIC5.52□□□□□ -1.53
HMGB1P09429 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGB1P09429 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGB1P09429 AC135352.1-201ENST00000506173 1418 ntBASIC5.52□□□□□ -1.53
HMGB1P09429 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB1P09429 AC067945.1-201ENST00000342609 618 ntBASIC5.52□□□□□ -1.53
HMGB1P09429 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HMGB1P09429 RNU4-92P-201ENST00000363783 136 ntBASIC5.52□□□□□ -1.53
HMGB1P09429 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB1P09429 CYB5AP4-201ENST00000396692 399 ntBASIC5.52□□□□□ -1.53
HMGB1P09429 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGB1P09429 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGB1P09429 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGB1P09429 AC091685.2-201ENST00000454924 864 ntBASIC5.52□□□□□ -1.53
HMGB1P09429 RPS3AP41-201ENST00000462701 778 ntBASIC5.52□□□□□ -1.53
HMGB1P09429 AC097493.1-201ENST00000463958 372 ntBASIC5.52□□□□□ -1.53
HMGB1P09429 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.52□□□□□ -1.53
HMGB1P09429 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB1P09429 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGB1P09429 IGKV2D-23-201ENST00000518179 286 ntBASIC5.52□□□□□ -1.53
HMGB1P09429 IGKV1-32-201ENST00000519290 311 ntBASIC5.52□□□□□ -1.53
HMGB1P09429 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB1P09429 BRD9P1-201ENST00000529855 560 ntBASIC5.52□□□□□ -1.53
HMGB1P09429 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.52□□□□□ -1.53
HMGB1P09429 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB1P09429 AC009220.3-201ENST00000604318 586 ntBASIC5.52□□□□□ -1.53
HMGB1P09429 AL022099.1-201ENST00000604551 712 ntBASIC5.52□□□□□ -1.53
HMGB1P09429 AC006270.3-201ENST00000605967 1036 ntBASIC5.52□□□□□ -1.53
HMGB1P09429 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB1P09429 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB1P09429 AC090897.3-201ENST00000636973 1157 ntBASIC5.52□□□□□ -1.53
HMGB1P09429 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
HMGB1P09429 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB1P09429 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC5.52□□□□□ -1.53
HMGB1P09429 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HMGB1P09429 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.52□□□□□ -1.53
HMGB1P09429 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HMGB1P09429 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HMGB1P09429 AL390862.1-201ENST00000635467 1469 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
HMGB1P09429 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGB1P09429 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGB1P09429 SGO1P2-201ENST00000429458 1589 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HMGB1P09429 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HMGB1P09429 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGB1P09429 AC139713.2-215ENST00000641428 5037 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
HMGB1P09429 RNU6-28P-201ENST00000362378 107 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 SNORA74A-201ENST00000364089 198 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 RNU6-173P-201ENST00000364215 104 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 AL356131.1-201ENST00000405826 414 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.51□□□□□ -1.53
HMGB1P09429 YPEL5P1-201ENST00000419731 367 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 FABP7P1-201ENST00000424004 391 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.51□□□□□ -1.53
HMGB1P09429 MTCYBP45-201ENST00000435243 565 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 Z80107.2-201ENST00000445127 392 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 USP9YP25-201ENST00000457708 443 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 AC108729.1-201ENST00000487812 947 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 RPL36AP41-201ENST00000493820 306 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGB1P09429 BNIP3P41-201ENST00000503774 571 ntBASIC5.51□□□□□ -1.53
HMGB1P09429 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.51□□□□□ -1.53
HMGB1P09429 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms