Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC2.82□□□□□ -1.96
SPTA1P02549 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.82□□□□□ -1.96
SPTA1P02549 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SPTA1P02549 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
SPTA1P02549 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SPTA1P02549 AL138827.1-201ENST00000402666 306 ntBASIC2.81□□□□□ -1.96
SPTA1P02549 DPPA2P2-201ENST00000418220 897 ntBASIC2.81□□□□□ -1.96
SPTA1P02549 TRIM60P18-201ENST00000441518 828 ntBASIC2.81□□□□□ -1.96
SPTA1P02549 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.81□□□□□ -1.96
SPTA1P02549 AP000926.3-201ENST00000497201 299 ntBASIC2.81□□□□□ -1.96
SPTA1P02549 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC2.81□□□□□ -1.96
SPTA1P02549 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.81□□□□□ -1.96
SPTA1P02549 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.81□□□□□ -1.96
SPTA1P02549 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.81□□□□□ -1.96
SPTA1P02549 AL583832.1-201ENST00000603227 784 ntBASIC2.81□□□□□ -1.96
SPTA1P02549 LSM1P2-201ENST00000604911 322 ntBASIC2.81□□□□□ -1.96
SPTA1P02549 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC2.81□□□□□ -1.96
SPTA1P02549 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SPTA1P02549 AC068647.1-201ENST00000489539 2265 ntBASIC2.81□□□□□ -1.96
SPTA1P02549 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
SPTA1P02549 PARD3-204ENST00000374768 799 ntTSL 3 BASIC2.81□□□□□ -1.96
SPTA1P02549 RNU6-851P-201ENST00000384565 107 ntBASIC2.81□□□□□ -1.96
SPTA1P02549 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC2.81□□□□□ -1.96
SPTA1P02549 AL009174.1-201ENST00000426577 416 ntBASIC2.81□□□□□ -1.96
SPTA1P02549 FTH1P6-201ENST00000430768 320 ntBASIC2.81□□□□□ -1.96
SPTA1P02549 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC2.81□□□□□ -1.96
SPTA1P02549 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.81□□□□□ -1.96
SPTA1P02549 CBX1P4-201ENST00000439415 457 ntBASIC2.81□□□□□ -1.96
SPTA1P02549 snoU13.18-201ENST00000459483 104 ntBASIC2.81□□□□□ -1.96
SPTA1P02549 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.81□□□□□ -1.96
SPTA1P02549 HIGD1AP13-201ENST00000509878 289 ntBASIC2.81□□□□□ -1.96
SPTA1P02549 AC018797.3-201ENST00000513388 1241 ntBASIC2.81□□□□□ -1.96
SPTA1P02549 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC2.81□□□□□ -1.96
SPTA1P02549 AP002812.4-201ENST00000532139 286 ntBASIC2.81□□□□□ -1.96
SPTA1P02549 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.81□□□□□ -1.96
SPTA1P02549 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.81□□□□□ -1.96
SPTA1P02549 AC078899.3-201ENST00000599065 212 ntBASIC2.81□□□□□ -1.96
SPTA1P02549 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SPTA1P02549 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
SPTA1P02549 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SPTA1P02549 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 AC017002.4-201ENST00000604721 1525 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 AC022031.1-201ENST00000585985 2593 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC2.8□□□□□ -1.96
SPTA1P02549 RNA5SP146-201ENST00000410743 123 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.8□□□□□ -1.96
SPTA1P02549 HSPE1P16-201ENST00000426640 348 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 YWHAEP5-201ENST00000431545 765 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 AC069540.1-201ENST00000446320 988 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 RPL23AP23-201ENST00000452590 471 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.8□□□□□ -1.96
SPTA1P02549 FTH1P11-201ENST00000517577 551 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.8□□□□□ -1.96
SPTA1P02549 AC022149.2-201ENST00000621061 203 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 AC063952.1-203ENST00000634410 658 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.8□□□□□ -1.96
SPTA1P02549 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SPTA1P02549 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SPTA1P02549 MIR9-1-201ENST00000385198 89 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 AL356057.1-202ENST00000402263 756 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.8□□□□□ -1.96
SPTA1P02549 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.8□□□□□ -1.96
SPTA1P02549 NPM1P29-201ENST00000483112 803 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.8□□□□□ -1.96
SPTA1P02549 RNA5SP356-201ENST00000515972 94 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SPTA1P02549 AC079600.2-201ENST00000550076 130 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC2.8□□□□□ -1.96
SPTA1P02549 AC015849.2-201ENST00000605738 409 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 AC100793.4-201ENST00000613683 429 ntBASIC2.8□□□□□ -1.96
SPTA1P02549 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.8□□□□□ -1.96
SPTA1P02549 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SPTA1P02549 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SPTA1P02549 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SPTA1P02549 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.8□□□□□ -1.96
SPTA1P02549 DLD-204ENST00000437604 1859 ntTSL 2 BASIC2.79□□□□□ -1.96
SPTA1P02549 AC073325.2-201ENST00000339545 159 ntBASIC2.79□□□□□ -1.96
SPTA1P02549 RHOT1P2-201ENST00000366423 333 ntBASIC2.79□□□□□ -1.96
SPTA1P02549 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SPTA1P02549 RNA5SP508-201ENST00000411327 119 ntBASIC2.79□□□□□ -1.96
SPTA1P02549 OR51A3P-201ENST00000413596 924 ntBASIC2.79□□□□□ -1.96
SPTA1P02549 HMGB3P14-201ENST00000494195 599 ntBASIC2.79□□□□□ -1.96
SPTA1P02549 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.79□□□□□ -1.96
SPTA1P02549 AC006272.2-201ENST00000594725 163 ntBASIC2.79□□□□□ -1.96
SPTA1P02549 AL365400.2-201ENST00000605604 902 ntBASIC2.79□□□□□ -1.96
SPTA1P02549 AC015813.4-201ENST00000610469 179 ntBASIC2.79□□□□□ -1.96
SPTA1P02549 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.79□□□□□ -1.96
SPTA1P02549 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.79□□□□□ -1.96
SPTA1P02549 AL513302.2-201ENST00000562313 1842 ntBASIC2.79□□□□□ -1.96
SPTA1P02549 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SPTA1P02549 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC2.79□□□□□ -1.96
SPTA1P02549 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SPTA1P02549 AC010733.2-201ENST00000589496 5702 ntBASIC2.79□□□□□ -1.96
SPTA1P02549 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC2.79□□□□□ -1.96
SPTA1P02549 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.79□□□□□ -1.96
SPTA1P02549 FTLP19-201ENST00000433300 394 ntBASIC2.79□□□□□ -1.96
SPTA1P02549 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.79□□□□□ -1.96
SPTA1P02549 AC117522.3-201ENST00000507974 584 ntBASIC2.79□□□□□ -1.96
SPTA1P02549 BTG4P1-201ENST00000510421 183 ntBASIC2.79□□□□□ -1.96
SPTA1P02549 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms