Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.07□□□□□ -1.76
NKX2-2O95096 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-2O95096 ZNF734P-201ENST00000419494 1534 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
NKX2-2O95096 GDI2P1-201ENST00000429312 1336 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-2O95096 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-2O95096 AC008033.1-201ENST00000216407 1162 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-2O95096 OR5P1P-201ENST00000299512 925 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 SNORA4.1-201ENST00000364263 144 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-2O95096 CYB5AP4-201ENST00000396692 399 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 AL356131.1-201ENST00000405826 414 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.07□□□□□ -1.76
NKX2-2O95096 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-2O95096 AL356387.2-201ENST00000422272 243 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 AC073335.1-201ENST00000427776 363 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 MTND4P6-201ENST00000438297 472 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.07□□□□□ -1.76
NKX2-2O95096 MTND5P2-201ENST00000442927 1142 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-2O95096 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-2O95096 TPT1P13-201ENST00000449760 499 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.07□□□□□ -1.76
NKX2-2O95096 AC026410.2-201ENST00000460281 156 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-2O95096 AC022034.3-201ENST00000471393 478 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 RPS29P22-201ENST00000472363 168 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 AC007686.1-201ENST00000488511 463 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 AC108941.1-201ENST00000502853 530 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-2O95096 OR5H5P-201ENST00000503164 928 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 AK3P4-201ENST00000504283 583 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-2O95096 ATP1B1P1-201ENST00000509767 915 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 AC008694.2-201ENST00000517591 306 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 AC104986.1-201ENST00000517978 436 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.07□□□□□ -1.76
NKX2-2O95096 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
NKX2-2O95096 DEFB131D-201ENST00000526803 184 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-2O95096 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
NKX2-2O95096 ELOCP32-201ENST00000548625 324 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC4.07□□□□□ -1.76
NKX2-2O95096 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.07□□□□□ -1.76
NKX2-2O95096 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.07□□□□□ -1.76
NKX2-2O95096 ISCA1P3-201ENST00000577104 373 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 LLPHP1-201ENST00000603571 367 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 AL009028.1-201ENST00000604895 802 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 AL159169.3-201ENST00000608871 561 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-2O95096 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.07□□□□□ -1.76
NKX2-2O95096 U6.101-201ENST00000637707 76 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-2O95096 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
NKX2-2O95096 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.07□□□□□ -1.76
NKX2-2O95096 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
NKX2-2O95096 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.07□□□□□ -1.76
NKX2-2O95096 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.07□□□□□ -1.76
NKX2-2O95096 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NKX2-2O95096 NOL8P1-201ENST00000508336 3529 ntBASIC4.07□□□□□ -1.76
NKX2-2O95096 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-2O95096 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-2O95096 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
NKX2-2O95096 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-2O95096 Z98755.1-201ENST00000407015 1384 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
NKX2-2O95096 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.06□□□□□ -1.76
NKX2-2O95096 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-2O95096 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NKX2-2O95096 RNA5SP332-201ENST00000391063 115 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 HMGB1P17-201ENST00000403495 628 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 PIGPP2-201ENST00000411569 458 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 USP9YP33-201ENST00000412220 421 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 RPS12P23-201ENST00000419579 400 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 AL022400.1-201ENST00000423946 935 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 TXNL1P1-201ENST00000429528 554 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 USP9YP35-201ENST00000435696 412 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 NPM1P33-201ENST00000438918 872 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 ART2BP-201ENST00000453501 499 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 SBDSP1-204ENST00000453858 737 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.06□□□□□ -1.76
NKX2-2O95096 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.06□□□□□ -1.76
NKX2-2O95096 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.06□□□□□ -1.76
NKX2-2O95096 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.06□□□□□ -1.76
NKX2-2O95096 XKRY-201ENST00000510392 1100 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.06□□□□□ -1.76
NKX2-2O95096 AC005798.1-201ENST00000513715 387 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
NKX2-2O95096 IGLVIV-53-201ENST00000520107 367 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.06□□□□□ -1.76
NKX2-2O95096 CYCSP2-201ENST00000558168 301 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 AL133457.1-201ENST00000564251 987 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NKX2-2O95096 AC234771.5-201ENST00000600161 514 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 AC004987.4-201ENST00000603383 338 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 AC106791.2-201ENST00000604680 391 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 AL354976.1-201ENST00000613843 387 ntBASIC4.06□□□□□ -1.76
NKX2-2O95096 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms