Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
GRIN3BO60391 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
GRIN3BO60391 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
GRIN3BO60391 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GRIN3BO60391 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
GRIN3BO60391 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.09□□□□□ -1.43
GRIN3BO60391 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
GRIN3BO60391 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
GRIN3BO60391 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
GRIN3BO60391 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.09□□□□□ -1.43
GRIN3BO60391 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
GRIN3BO60391 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
GRIN3BO60391 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
GRIN3BO60391 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.09□□□□□ -1.43
GRIN3BO60391 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
GRIN3BO60391 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
GRIN3BO60391 U8.14-201ENST00000390843 143 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 RN7SKP285-201ENST00000410137 318 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.09□□□□□ -1.43
GRIN3BO60391 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC6.09□□□□□ -1.43
GRIN3BO60391 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC6.09□□□□□ -1.43
GRIN3BO60391 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC6.09□□□□□ -1.43
GRIN3BO60391 MTND4LP10-201ENST00000435146 291 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 AC073614.1-201ENST00000438690 650 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 PGBD4P3-201ENST00000440731 581 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 AC004865.1-201ENST00000442276 1003 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC6.09□□□□□ -1.43
GRIN3BO60391 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC6.09□□□□□ -1.43
GRIN3BO60391 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC6.09□□□□□ -1.43
GRIN3BO60391 HMGB1P4-201ENST00000455362 567 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC6.09□□□□□ -1.43
GRIN3BO60391 RPL23AP24-201ENST00000458203 385 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 RPL23AP56-201ENST00000460778 453 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 RN7SL303P-201ENST00000469773 251 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 AC013828.1-201ENST00000481845 158 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 AC041039.1-201ENST00000485656 536 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 AC022133.1-201ENST00000490961 571 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 UBA52P3-201ENST00000491303 382 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 ARL2BPP6-201ENST00000512757 439 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 AC010342.1-201ENST00000514047 877 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC6.09□□□□□ -1.43
GRIN3BO60391 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC6.09□□□□□ -1.43
GRIN3BO60391 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC6.09□□□□□ -1.43
GRIN3BO60391 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.09□□□□□ -1.43
GRIN3BO60391 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.09□□□□□ -1.43
GRIN3BO60391 AC112191.3-201ENST00000604371 277 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 AC092954.2-201ENST00000609103 430 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 AP001521.1-201ENST00000609150 300 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 AC008250.2-201ENST00000615261 205 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.09□□□□□ -1.43
GRIN3BO60391 AL445567.2-201ENST00000618935 498 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 BX005214.3-202ENST00000619809 325 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC6.09□□□□□ -1.43
GRIN3BO60391 AC099654.5-201ENST00000636479 350 ntBASIC6.09□□□□□ -1.43
GRIN3BO60391 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
GRIN3BO60391 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
GRIN3BO60391 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
GRIN3BO60391 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
GRIN3BO60391 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
GRIN3BO60391 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.09□□□□□ -1.43
GRIN3BO60391 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
GRIN3BO60391 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
GRIN3BO60391 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
GRIN3BO60391 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
GRIN3BO60391 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
GRIN3BO60391 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
GRIN3BO60391 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
GRIN3BO60391 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
GRIN3BO60391 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
GRIN3BO60391 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
GRIN3BO60391 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
GRIN3BO60391 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.08□□□□□ -1.44
GRIN3BO60391 AC021242.1-201ENST00000507315 2035 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
GRIN3BO60391 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
GRIN3BO60391 SNORA72.1-201ENST00000363485 129 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 Y_RNA.372-201ENST00000365599 102 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
GRIN3BO60391 ERMN-204ENST00000409925 556 ntTSL 4 BASIC6.08□□□□□ -1.44
GRIN3BO60391 DPPA2P2-201ENST00000418220 897 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC6.08□□□□□ -1.44
GRIN3BO60391 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.08□□□□□ -1.44
GRIN3BO60391 BX890604.2-201ENST00000427883 474 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 AC109583.1-201ENST00000432156 268 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.08□□□□□ -1.44
GRIN3BO60391 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
GRIN3BO60391 RPL7AP52-201ENST00000458096 790 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 HMGN1P10-201ENST00000474557 553 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.08□□□□□ -1.44
GRIN3BO60391 POU5F1P7-201ENST00000508759 541 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC6.08□□□□□ -1.44
GRIN3BO60391 NDUFB4P2-201ENST00000509515 391 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 GAPDHP62-201ENST00000515313 990 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC6.08□□□□□ -1.44
GRIN3BO60391 AC022360.1-201ENST00000521058 340 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC6.08□□□□□ -1.44
GRIN3BO60391 OR8R1P-201ENST00000543943 764 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 ARF4P1-201ENST00000605447 541 ntBASIC6.08□□□□□ -1.44
GRIN3BO60391 AP003117.2-201ENST00000606010 545 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms