Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.48□□□□□ -2.01
SSSCA1O60232 AL133393.1-201ENST00000603277 287 ntBASIC2.48□□□□□ -2.01
SSSCA1O60232 AC015849.2-201ENST00000605738 409 ntBASIC2.48□□□□□ -2.01
SSSCA1O60232 AC243312.2-201ENST00000623340 601 ntBASIC2.48□□□□□ -2.01
SSSCA1O60232 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.48□□□□□ -2.01
SSSCA1O60232 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
SSSCA1O60232 ZNF285B-201ENST00000561698 1767 ntBASIC2.48□□□□□ -2.01
SSSCA1O60232 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SSSCA1O60232 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SSSCA1O60232 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
SSSCA1O60232 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
SSSCA1O60232 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SSSCA1O60232 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SSSCA1O60232 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.47□□□□□ -2.01
SSSCA1O60232 API5P2-201ENST00000397055 1498 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 MTND5P7-201ENST00000413558 1798 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
SSSCA1O60232 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
SSSCA1O60232 SNORA31-201ENST00000362607 130 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 RNA5SP295-201ENST00000362655 121 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 MIR181B1-201ENST00000385240 110 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 SSR1P1-201ENST00000407630 814 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 SNORD88.1-201ENST00000408684 91 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 HMGN1P24-201ENST00000412282 298 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.47□□□□□ -2.01
SSSCA1O60232 AC063979.1-201ENST00000415539 377 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 AL451074.5-201ENST00000415894 435 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 AC011242.1-201ENST00000433596 1158 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 RPL21P23-201ENST00000446654 460 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 AC093392.2-201ENST00000450682 337 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 ELOCP23-201ENST00000452014 332 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC2.47□□□□□ -2.01
SSSCA1O60232 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.47□□□□□ -2.01
SSSCA1O60232 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.47□□□□□ -2.01
SSSCA1O60232 AC006483.1-201ENST00000487308 313 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 ATG10-AS1-201ENST00000504846 648 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.47□□□□□ -2.01
SSSCA1O60232 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.47□□□□□ -2.01
SSSCA1O60232 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.47□□□□□ -2.01
SSSCA1O60232 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.47□□□□□ -2.01
SSSCA1O60232 AC007224.1-201ENST00000564410 144 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.47□□□□□ -2.01
SSSCA1O60232 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.47□□□□□ -2.01
SSSCA1O60232 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.47□□□□□ -2.01
SSSCA1O60232 PRELID3BP8-201ENST00000604148 295 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.47□□□□□ -2.01
SSSCA1O60232 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC2.47□□□□□ -2.01
SSSCA1O60232 AC073348.1-201ENST00000623002 331 ntBASIC2.47□□□□□ -2.01
SSSCA1O60232 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.47□□□□□ -2.01
SSSCA1O60232 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
SSSCA1O60232 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SSSCA1O60232 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SSSCA1O60232 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.46□□□□□ -2.02
SSSCA1O60232 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.46□□□□□ -2.02
SSSCA1O60232 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
SSSCA1O60232 SNORA5A-201ENST00000384111 134 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 RNU6-225P-201ENST00000384613 103 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 MIR218-2-201ENST00000385006 110 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 RNA5SP105-201ENST00000391123 113 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SSSCA1O60232 AL031121.1-201ENST00000406553 254 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 RPL23AP47-201ENST00000408017 460 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.46□□□□□ -2.02
SSSCA1O60232 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.46□□□□□ -2.02
SSSCA1O60232 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC2.46□□□□□ -2.02
SSSCA1O60232 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.46□□□□□ -2.02
SSSCA1O60232 ELOCP6-201ENST00000429066 328 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 SETP8-201ENST00000435341 628 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SSSCA1O60232 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC2.46□□□□□ -2.02
SSSCA1O60232 HSPE1P28-201ENST00000443139 211 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 RPS15AP1-201ENST00000457423 391 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 ELOCP12-201ENST00000458706 328 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 RPS17P11-201ENST00000474297 293 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 RPS27AP1-201ENST00000475545 471 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 AC106707.2-201ENST00000484182 374 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.46□□□□□ -2.02
SSSCA1O60232 RNU1-95P-201ENST00000516357 160 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 RNU1-128P-201ENST00000516704 160 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 RN7SKP282-201ENST00000516824 299 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 SNORA31.26-201ENST00000517250 137 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.46□□□□□ -2.02
SSSCA1O60232 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC2.46□□□□□ -2.02
SSSCA1O60232 SYF2P1-201ENST00000550658 413 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SSSCA1O60232 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.46□□□□□ -2.02
SSSCA1O60232 AC018754.1-201ENST00000607486 925 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.46□□□□□ -2.02
SSSCA1O60232 AC069234.5-201ENST00000611056 416 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 AL020991.1-201ENST00000612314 373 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 AC100793.4-201ENST00000613683 429 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 AC105227.2-201ENST00000615075 605 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 AC009464.1-201ENST00000615731 469 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.46□□□□□ -2.02
SSSCA1O60232 AC009093.8-201ENST00000641769 292 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SSSCA1O60232 AC117529.2-201ENST00000512159 2068 ntBASIC2.46□□□□□ -2.02
SSSCA1O60232 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SSSCA1O60232 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.45□□□□□ -2.02
SSSCA1O60232 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms