Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX1O00570 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SOX1O00570 AC105074.1-201ENST00000623380 3095 ntBASIC5.93□□□□□ -1.46
SOX1O00570 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SOX1O00570 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SOX1O00570 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX1O00570 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SOX1O00570 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX1O00570 OR4G1P-203ENST00000641984 1631 ntBASIC5.93□□□□□ -1.46
SOX1O00570 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SOX1O00570 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX1O00570 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SOX1O00570 Y_RNA.259-201ENST00000364619 101 ntBASIC5.93□□□□□ -1.46
SOX1O00570 RNU6-444P-201ENST00000383988 108 ntBASIC5.93□□□□□ -1.46
SOX1O00570 RNU6-43P-201ENST00000384302 107 ntBASIC5.93□□□□□ -1.46
SOX1O00570 RNU6-225P-201ENST00000384613 103 ntBASIC5.93□□□□□ -1.46
SOX1O00570 RNU6-1148P-201ENST00000410992 104 ntBASIC5.93□□□□□ -1.46
SOX1O00570 MTCYBP8-201ENST00000422855 651 ntBASIC5.93□□□□□ -1.46
SOX1O00570 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX1O00570 RGS17P1-201ENST00000423358 553 ntBASIC5.93□□□□□ -1.46
SOX1O00570 AC022022.1-201ENST00000430304 178 ntBASIC5.93□□□□□ -1.46
SOX1O00570 AC119618.1-201ENST00000434191 222 ntBASIC5.93□□□□□ -1.46
SOX1O00570 AL590399.4-201ENST00000436561 601 ntBASIC5.93□□□□□ -1.46
SOX1O00570 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX1O00570 RPL23AP15-201ENST00000450202 459 ntBASIC5.93□□□□□ -1.46
SOX1O00570 RPL10P17-201ENST00000453852 316 ntBASIC5.93□□□□□ -1.46
SOX1O00570 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX1O00570 Y_RNA.639-201ENST00000458981 102 ntBASIC5.93□□□□□ -1.46
SOX1O00570 RNU7-63P-201ENST00000459054 62 ntBASIC5.93□□□□□ -1.46
SOX1O00570 ACA64.4-201ENST00000459070 127 ntBASIC5.93□□□□□ -1.46
SOX1O00570 snoU13.1-201ENST00000459157 104 ntBASIC5.93□□□□□ -1.46
SOX1O00570 snoU13.22-201ENST00000459428 104 ntBASIC5.93□□□□□ -1.46
SOX1O00570 Y_RNA.631-201ENST00000459607 101 ntBASIC5.93□□□□□ -1.46
SOX1O00570 RN7SL352P-201ENST00000466002 277 ntBASIC5.93□□□□□ -1.46
SOX1O00570 RPL23AP40-201ENST00000487630 390 ntBASIC5.93□□□□□ -1.46
SOX1O00570 AC090096.1-201ENST00000489168 390 ntBASIC5.93□□□□□ -1.46
SOX1O00570 AC090453.1-201ENST00000495560 436 ntBASIC5.93□□□□□ -1.46
SOX1O00570 EIF4EP3-201ENST00000498782 656 ntBASIC5.93□□□□□ -1.46
SOX1O00570 KLHL2P1-201ENST00000508691 521 ntBASIC5.93□□□□□ -1.46
SOX1O00570 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
SOX1O00570 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX1O00570 AC074255.1-201ENST00000511259 501 ntBASIC5.93□□□□□ -1.46
SOX1O00570 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX1O00570 NPM1P41-201ENST00000512920 831 ntBASIC5.93□□□□□ -1.46
SOX1O00570 EIF3KP3-201ENST00000514461 639 ntBASIC5.93□□□□□ -1.46
SOX1O00570 RNU4-49P-201ENST00000516080 140 ntBASIC5.93□□□□□ -1.46
SOX1O00570 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX1O00570 OR4R1P-201ENST00000529879 463 ntBASIC5.93□□□□□ -1.46
SOX1O00570 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX1O00570 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.93□□□□□ -1.46
SOX1O00570 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX1O00570 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX1O00570 MIR4675-201ENST00000577898 77 ntBASIC5.93□□□□□ -1.46
SOX1O00570 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX1O00570 AC067852.5-201ENST00000589299 310 ntBASIC5.93□□□□□ -1.46
SOX1O00570 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX1O00570 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX1O00570 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.93□□□□□ -1.46
SOX1O00570 SNRPGP17-201ENST00000603780 214 ntBASIC5.93□□□□□ -1.46
SOX1O00570 AC124312.5-201ENST00000604451 268 ntBASIC5.93□□□□□ -1.46
SOX1O00570 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX1O00570 AL031658.2-201ENST00000616850 651 ntBASIC5.93□□□□□ -1.46
SOX1O00570 AC091953.2-201ENST00000623979 160 ntBASIC5.93□□□□□ -1.46
SOX1O00570 MIR6830-201ENST00000636015 70 ntBASIC5.93□□□□□ -1.46
SOX1O00570 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SOX1O00570 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX1O00570 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX1O00570 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SOX1O00570 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.93□□□□□ -1.46
SOX1O00570 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SOX1O00570 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SOX1O00570 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.93□□□□□ -1.46
SOX1O00570 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
SOX1O00570 AC005225.5-201ENST00000623547 2225 ntBASIC5.93□□□□□ -1.46
SOX1O00570 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SOX1O00570 AC005618.1-201ENST00000606901 3148 ntBASIC5.92□□□□□ -1.46
SOX1O00570 AC006020.1-201ENST00000420179 1854 ntBASIC5.92□□□□□ -1.46
SOX1O00570 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.92□□□□□ -1.46
SOX1O00570 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX1O00570 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SOX1O00570 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX1O00570 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX1O00570 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX1O00570 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SOX1O00570 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SOX1O00570 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SOX1O00570 RN7SKP95-201ENST00000362860 303 ntBASIC5.92□□□□□ -1.46
SOX1O00570 RNU1-85P-201ENST00000364127 164 ntBASIC5.92□□□□□ -1.46
SOX1O00570 Y_RNA.255-201ENST00000364581 97 ntBASIC5.92□□□□□ -1.46
SOX1O00570 RNU6-744P-201ENST00000365557 107 ntBASIC5.92□□□□□ -1.46
SOX1O00570 RNU6-1316P-201ENST00000384242 108 ntBASIC5.92□□□□□ -1.46
SOX1O00570 RNU6-463P-201ENST00000384340 107 ntBASIC5.92□□□□□ -1.46
SOX1O00570 SNORA37-201ENST00000384504 129 ntBASIC5.92□□□□□ -1.46
SOX1O00570 MIR134-201ENST00000385258 73 ntBASIC5.92□□□□□ -1.46
SOX1O00570 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SOX1O00570 AL031679.1-201ENST00000400616 525 ntBASIC5.92□□□□□ -1.46
SOX1O00570 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX1O00570 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.92□□□□□ -1.46
SOX1O00570 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC5.92□□□□□ -1.46
SOX1O00570 CHIAP3-201ENST00000423668 1133 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms