Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 OR3D1P-201ENST00000438288 955 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC064862.5-201ENST00000440618 334 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 RN7SL83P-201ENST00000468131 297 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC005741.1-201ENST00000511094 432 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 RNU6-864P-201ENST00000516256 108 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 COX6CP3-201ENST00000580869 223 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC016925.2-201ENST00000605108 242 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC023813.4-201ENST00000607580 580 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC084781.2-201ENST00000615568 161 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 MIR6864-201ENST00000617935 70 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC099494.2-201ENST00000623371 978 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC007603.3-201ENST00000636915 979 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 ELL2P4-201ENST00000446870 1376 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 PANDAR-201ENST00000629595 1506 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC004656.1-201ENST00000568479 4951 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 GNL2P1-201ENST00000451274 2190 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 Y_RNA.146-201ENST00000363549 102 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 RNU6-1243P-201ENST00000364028 107 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 Y_RNA.373-201ENST00000365600 103 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 Y_RNA.414-201ENST00000384011 101 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 RNU6-639P-201ENST00000384074 107 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 RNU6-463P-201ENST00000384340 107 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 RN7SKP247-201ENST00000411094 308 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 RNA5SP155-201ENST00000411154 129 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 RPL21P89-201ENST00000444021 467 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 POU5F1P5-201ENST00000445059 658 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AC016724.1-201ENST00000453215 421 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 MTND1P9-201ENST00000453775 944 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AC099670.1-201ENST00000455141 783 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 VN1R17P-201ENST00000472048 1090 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 RPL37P23-201ENST00000492641 294 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AC116562.3-201ENST00000506136 177 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 RNU2-10P-201ENST00000516375 211 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AC068587.5-201ENST00000528506 175 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 TRIM51DP-201ENST00000529746 596 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 OR4P1P-201ENST00000530808 1136 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AL163153.1-201ENST00000554223 283 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AL355836.1-201ENST00000555951 870 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 MIR4775-201ENST00000581168 75 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 MIR4433B-201ENST00000581329 102 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 MIR4424-201ENST00000585257 86 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 APOOP1-201ENST00000604695 592 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AC123768.4-201ENST00000616244 701 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.1□□□□□ -1.59
SHISA3A0PJX4 AC211486.4-201ENST00000621495 113 ntBASIC5.1□□□□□ -1.59
SHISA3A0PJX4 MIR6503-201ENST00000622884 86 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms