Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC068790.5-201ENST00000602741 355 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AL161756.2-201ENST00000604597 246 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AC018618.2-201ENST00000604770 446 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AC079610.2-201ENST00000604818 690 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 MIR8058-201ENST00000615737 89 ntBASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMIM28A0A1B0GU29 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AC073346.2-201ENST00000624724 2058 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AL133383.2-201ENST00000622958 2336 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 METTL21EP-201ENST00000298105 713 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 RNU6-317P-201ENST00000384031 107 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 ATF1P1-201ENST00000406040 927 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 RNA5SP120-201ENST00000410900 112 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 KRR1P1-201ENST00000419430 803 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 MTCO2P1-201ENST00000424648 477 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 RPL21P13-201ENST00000488305 481 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 RPS6P4-201ENST00000494693 758 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AC106734.1-201ENST00000568646 663 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AC006557.5-201ENST00000603126 811 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 OR6R2P-201ENST00000609216 300 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AC000123.2-201ENST00000623124 461 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AC106730.3-201ENST00000624568 641 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AC127502.3-201ENST00000636170 1206 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 CEP170P1-201ENST00000502249 4587 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 HSPA8P19-201ENST00000505359 1517 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 AC032011.1-201ENST00000611703 1549 ntBASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SMIM28A0A1B0GU29 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 RNU6-1279P-201ENST00000383917 103 ntBASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 RNU6-481P-201ENST00000384194 107 ntBASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 MIR708-201ENST00000390708 88 ntBASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 UBE2D3P3-201ENST00000426992 425 ntBASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 BX510359.1-201ENST00000456973 237 ntBASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 OR4R3P-201ENST00000525084 838 ntBASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AP000916.1-201ENST00000533869 835 ntBASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AC015911.5-201ENST00000587076 451 ntBASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AC115085.1-201ENST00000588924 229 ntBASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AC020914.4-201ENST00000597690 277 ntBASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 BNIP3P38-201ENST00000601117 544 ntBASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AC098483.2-201ENST00000603158 454 ntBASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AC022149.2-201ENST00000621061 203 ntBASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AC067852.7-201ENST00000623270 535 ntBASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AL359715.5-201ENST00000623431 443 ntBASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 AC083865.1-201ENST00000636634 831 ntBASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMIM28A0A1B0GU29 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 193.9 ms