Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AC023632.4-201ENST00000517783 191 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 SOD1P3-201ENST00000518682 454 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AC026403.1-201ENST00000518938 295 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 MED28P5-201ENST00000528254 438 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AC039056.2-201ENST00000622261 511 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AC073476.4-201ENST00000628409 72 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AL034408.1-202ENST00000636088 415 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AC009093.8-201ENST00000641769 292 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AL365440.1-201ENST00000436135 2167 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 AC032011.1-201ENST00000611703 1549 ntBASIC2.58□□□□□ -2
HLA-DRB4X5D2U9 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 SNORA70E-201ENST00000384492 135 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 RSL24D1P1-201ENST00000404972 493 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 RN7SKP111-201ENST00000410349 271 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AC013404.1-201ENST00000413068 249 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 SYF2P2-201ENST00000417620 583 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 DBIP2-201ENST00000419076 262 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AL513174.1-201ENST00000423182 629 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 HSPD1P21-201ENST00000436541 245 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 CBX1P4-201ENST00000439415 457 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AC092641.1-201ENST00000440229 772 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AL662791.1-201ENST00000441992 928 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AL133372.1-201ENST00000493565 745 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 POU5F1P7-201ENST00000508759 541 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 RN7SKP13-201ENST00000515933 244 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AC107934.2-201ENST00000518653 310 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 OR4T1P-201ENST00000554933 911 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AC010928.3-201ENST00000587712 541 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AC012557.1-201ENST00000607115 611 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AC243312.2-201ENST00000623340 601 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AL157700.1-201ENST00000561973 1432 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 AC004972.1-201ENST00000623934 2209 ntBASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DRB4X5D2U9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 SNORA62.3-201ENST00000365110 153 ntBASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 MIR320B1-201ENST00000390209 79 ntBASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 HMGB3P18-201ENST00000406327 590 ntBASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 AC004987.3-201ENST00000413879 771 ntBASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 RPL23AP82-202ENST00000427528 469 ntBASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 OR2AS1P-201ENST00000427827 319 ntBASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 OR2B8P-201ENST00000432841 938 ntBASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 AL035458.1-201ENST00000433096 585 ntBASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 AC073063.1-201ENST00000434352 607 ntBASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 RPL21P23-201ENST00000446654 460 ntBASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 AC007967.1-201ENST00000455422 1159 ntBASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 CENPBD1P1-201ENST00000464061 469 ntBASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 HMGN1P15-201ENST00000513870 295 ntBASIC2.56□□□□□ -2
HLA-DRB4X5D2U9 IGKV2D-19-201ENST00000523346 262 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms