Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RN7SKP224-201ENST00000364140 325 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 RNU6-452P-201ENST00000384406 107 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 RNU6-185P-201ENST00000384421 107 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 Y_RNA.516-201ENST00000384541 124 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 RNU6-244P-201ENST00000391028 104 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 LAP3P1-201ENST00000403648 294 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 SNORA11F-201ENST00000408237 128 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 RNA5SP498-201ENST00000411342 120 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC013404.1-201ENST00000413068 249 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 TAF13P2-201ENST00000416876 286 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 NPM1P11-201ENST00000417106 855 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC027644.1-201ENST00000419595 298 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 Z74021.1-201ENST00000423610 407 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AL353093.1-201ENST00000441292 436 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 RPS26P28-201ENST00000470806 348 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 RNA5SP497-201ENST00000516081 97 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 NDUFA5P2-201ENST00000519723 344 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 CCNG2P1-201ENST00000549521 1000 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AL133241.1-201ENST00000556832 487 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC106785.1-201ENST00000565935 262 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 CYP2C60P-201ENST00000566088 139 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AL121834.1-201ENST00000572284 509 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AP000403.1-201ENST00000603349 851 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AL136363.2-201ENST00000604173 851 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC021749.1-201ENST00000604322 607 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC107075.1-201ENST00000613695 314 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 MIR6891-201ENST00000618788 93 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AF246928.1-201ENST00000623768 87 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC019226.1-201ENST00000625666 515 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC140479.6-201ENST00000633535 357 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 FP325313.1-201ENST00000638228 703 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC107027.3-201ENST00000565095 3473 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 AC012020.1-201ENST00000624541 1728 ntBASIC4.55□□□□□ -1.68
EBF3Q9H4W6 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
EBF3Q9H4W6 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 ENSAP3-201ENST00000312710 333 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 RNU6-543P-201ENST00000362576 108 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 Y_RNA.41-201ENST00000362646 102 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 RNU6-694P-201ENST00000364071 147 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 RNU1-13P-201ENST00000384499 162 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 Y_RNA.517-201ENST00000384551 106 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 MIR3065-201ENST00000390137 79 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC025750.1-201ENST00000399891 379 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 MIR921-201ENST00000401133 56 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AL590084.2-201ENST00000401481 382 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AL022722.2-201ENST00000402519 180 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 LINC00888-204ENST00000487386 421 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC113430.1-201ENST00000506872 718 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC113347.3-201ENST00000509113 148 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 RNA5SP154-201ENST00000516193 111 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
EBF3Q9H4W6 DUXAP1-201ENST00000556632 463 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AC087465.1-201ENST00000560574 245 ntBASIC4.54□□□□□ -1.68
EBF3Q9H4W6 AL512347.1-201ENST00000566420 503 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 254.8 ms