Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 SULT1C2P1-202ENST00000562418 459 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AC112187.2-201ENST00000604345 283 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AC023813.4-201ENST00000607580 580 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AC103710.4-201ENST00000609301 899 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AL121890.2-201ENST00000617644 465 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AP002799.1-201ENST00000623552 423 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 GDI2P1-201ENST00000429312 1336 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 DCAF13P1-201ENST00000495256 1330 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 AC008079.2-201ENST00000623543 20396 ntBASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
AMBRA1Q9C0C7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 SNORA73.1-201ENST00000363107 205 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 RNU1-43P-201ENST00000365052 165 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 SNORA56-201ENST00000383966 129 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 RNU5A-6P-201ENST00000384136 116 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 SNORD96B-201ENST00000386148 79 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 SNORA40.3-201ENST00000390964 122 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 Y_RNA.582-201ENST00000391023 95 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 RN7SKP114-201ENST00000410327 279 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 FAR2P2-201ENST00000413041 594 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 FAR2P4-202ENST00000425399 584 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 RPS29P9-201ENST00000440360 171 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AL353572.1-201ENST00000442490 417 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 VN1R10P-201ENST00000447106 875 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 MEMO1P3-201ENST00000459811 302 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AC006511.1-201ENST00000470614 315 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 DEFB109F-201ENST00000491870 277 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AF131216.2-201ENST00000512316 564 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AP002748.2-201ENST00000528671 348 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 GSTP1P1-201ENST00000548078 319 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 EEF1B2P4-201ENST00000551398 348 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 EIF5A2P1-201ENST00000564027 460 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AC234778.2-201ENST00000566241 354 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AL606834.2-201ENST00000602954 668 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 BNIP3P11-201ENST00000603878 563 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 PRELID3BP8-201ENST00000604148 295 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AL109618.2-201ENST00000605527 211 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AP002505.2-201ENST00000623585 696 ntBASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
AMBRA1Q9C0C7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 Y_RNA.97-201ENST00000363094 102 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 RNU1-83P-201ENST00000363426 164 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 RNU1-85P-201ENST00000364127 164 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 SNORA70.10-201ENST00000384515 134 ntBASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
AMBRA1Q9C0C7 U3.36-201ENST00000408418 213 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms