Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PKP4Q99569 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PKP4Q99569 NACA3P-201ENST00000359690 648 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 RNU6-623P-201ENST00000363143 105 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 RNA5SP175-201ENST00000364275 119 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PKP4Q99569 SNORD116-4-201ENST00000384733 96 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 SNORA11F-201ENST00000408237 128 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.23□□□□□ -1.73
PKP4Q99569 PDSS1P1-201ENST00000422953 1114 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 DNAJC19P7-201ENST00000428811 344 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.23□□□□□ -1.73
PKP4Q99569 AC092393.1-201ENST00000439625 742 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 UBE2V1P5-201ENST00000440070 405 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 MTND5P2-201ENST00000442927 1142 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.23□□□□□ -1.73
PKP4Q99569 NPM1P13-201ENST00000452663 865 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.23□□□□□ -1.73
PKP4Q99569 CDC42P1-201ENST00000456658 548 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 RN7SL98P-201ENST00000462271 300 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 MTND4LP3-201ENST00000468320 276 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.23□□□□□ -1.73
PKP4Q99569 RN7SL810P-201ENST00000493031 276 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.23□□□□□ -1.73
PKP4Q99569 XKRY-201ENST00000510392 1100 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 PRELID3BP4-201ENST00000515476 571 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 snoZ278.1-201ENST00000517059 112 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.23□□□□□ -1.73
PKP4Q99569 C1GALT1P3-201ENST00000522049 819 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.23□□□□□ -1.73
PKP4Q99569 AC100770.1-201ENST00000532310 322 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.23□□□□□ -1.73
PKP4Q99569 AL352979.3-201ENST00000553515 247 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 NBEAP1-201ENST00000554452 979 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.23□□□□□ -1.73
PKP4Q99569 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.23□□□□□ -1.73
PKP4Q99569 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.23□□□□□ -1.73
PKP4Q99569 AC002400.1-201ENST00000569310 726 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 MIR5096-201ENST00000583713 70 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.23□□□□□ -1.73
PKP4Q99569 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.23□□□□□ -1.73
PKP4Q99569 AC113403.1-201ENST00000604910 193 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 AL583856.2-201ENST00000606298 543 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 AL021997.2-201ENST00000615674 271 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 AL121873.1-201ENST00000616013 524 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 AL158163.2-201ENST00000619110 700 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.23□□□□□ -1.73
PKP4Q99569 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PKP4Q99569 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PKP4Q99569 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PKP4Q99569 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PKP4Q99569 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PKP4Q99569 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
PKP4Q99569 KPNA2P2-201ENST00000419546 1489 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.23□□□□□ -1.73
PKP4Q99569 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PKP4Q99569 AC008725.1-201ENST00000605123 2263 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 AC017104.4-201ENST00000636283 1592 ntBASIC4.23□□□□□ -1.73
PKP4Q99569 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PKP4Q99569 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PKP4Q99569 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.22□□□□□ -1.73
PKP4Q99569 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.22□□□□□ -1.73
PKP4Q99569 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
PKP4Q99569 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
PKP4Q99569 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PKP4Q99569 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PKP4Q99569 RNU4-24P-201ENST00000364565 139 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.22□□□□□ -1.73
PKP4Q99569 SNORA40.2-201ENST00000390847 128 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 SNORD66.1-201ENST00000391230 76 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 AL583835.1-201ENST00000399570 407 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 AL138880.1-201ENST00000405824 642 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 RNA5SP146-201ENST00000410743 123 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 BTF3L4P1-201ENST00000413813 468 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.22□□□□□ -1.73
PKP4Q99569 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.22□□□□□ -1.73
PKP4Q99569 RPL7P53-201ENST00000421245 739 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 AC009480.2-201ENST00000422916 432 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 AC234781.2-201ENST00000426370 994 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.22□□□□□ -1.73
PKP4Q99569 AL035407.1-201ENST00000429211 571 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.22□□□□□ -1.73
PKP4Q99569 MTND1P32-201ENST00000433043 938 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 RPL23AP52-201ENST00000439311 478 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 AC002542.1-201ENST00000440683 193 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 TPT1P13-201ENST00000449760 499 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 DNAJC19P8-201ENST00000452887 259 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 AL121877.1-201ENST00000453704 622 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 BX248409.1-201ENST00000455497 255 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 RPL23AP24-201ENST00000458203 385 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.22□□□□□ -1.73
PKP4Q99569 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.22□□□□□ -1.73
PKP4Q99569 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.22□□□□□ -1.73
PKP4Q99569 AC006463.2-201ENST00000473326 348 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 AC087385.1-201ENST00000475062 312 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 AC108734.3-201ENST00000481241 1165 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 AC025674.1-201ENST00000507074 324 ntBASIC4.22□□□□□ -1.73
PKP4Q99569 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.22□□□□□ -1.73
PKP4Q99569 STMN1P2-201ENST00000508435 439 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms