Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AL137072.1-201ENST00000603444 466 ntBASIC4.46□□□□□ -1.7
USP47Q96K76 AC138473.1-201ENST00000605717 526 ntBASIC4.46□□□□□ -1.7
USP47Q96K76 AC012213.4-201ENST00000606457 354 ntBASIC4.46□□□□□ -1.7
USP47Q96K76 AC138932.5-201ENST00000617759 563 ntBASIC4.46□□□□□ -1.7
USP47Q96K76 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
USP47Q96K76 AC012020.1-201ENST00000624541 1728 ntBASIC4.45□□□□□ -1.7
USP47Q96K76 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.45□□□□□ -1.7
USP47Q96K76 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP47Q96K76 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP47Q96K76 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
USP47Q96K76 RPS7P13-201ENST00000413955 498 ntBASIC4.45□□□□□ -1.7
USP47Q96K76 RPS12P23-201ENST00000419579 400 ntBASIC4.45□□□□□ -1.7
USP47Q96K76 RPS12P5-201ENST00000423449 371 ntBASIC4.45□□□□□ -1.7
USP47Q96K76 USP9YP36-201ENST00000424581 829 ntBASIC4.45□□□□□ -1.7
USP47Q96K76 RPL23AP69-201ENST00000431134 458 ntBASIC4.45□□□□□ -1.7
USP47Q96K76 USP9YP31-201ENST00000431405 881 ntBASIC4.45□□□□□ -1.7
USP47Q96K76 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.45□□□□□ -1.7
USP47Q96K76 RPL7L1P1-201ENST00000448259 785 ntBASIC4.45□□□□□ -1.7
USP47Q96K76 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
USP47Q96K76 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.45□□□□□ -1.7
USP47Q96K76 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.45□□□□□ -1.7
USP47Q96K76 AP001207.2-201ENST00000519490 539 ntBASIC4.45□□□□□ -1.7
USP47Q96K76 AC004024.1-201ENST00000549244 247 ntBASIC4.45□□□□□ -1.7
USP47Q96K76 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
USP47Q96K76 AC015849.2-201ENST00000605738 409 ntBASIC4.45□□□□□ -1.7
USP47Q96K76 AC084036.1-201ENST00000609190 508 ntBASIC4.45□□□□□ -1.7
USP47Q96K76 AC008121.2-201ENST00000614647 523 ntBASIC4.45□□□□□ -1.7
USP47Q96K76 AL356274.1-201ENST00000617064 410 ntBASIC4.45□□□□□ -1.7
USP47Q96K76 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.45□□□□□ -1.7
USP47Q96K76 AP001005.3-201ENST00000622049 129 ntBASIC4.45□□□□□ -1.7
USP47Q96K76 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.45□□□□□ -1.7
USP47Q96K76 AC091903.1-201ENST00000624322 454 ntBASIC4.45□□□□□ -1.7
USP47Q96K76 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.45□□□□□ -1.7
USP47Q96K76 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.45□□□□□ -1.7
USP47Q96K76 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP47Q96K76 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
USP47Q96K76 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP47Q96K76 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP47Q96K76 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
USP47Q96K76 AC073325.2-201ENST00000339545 159 ntBASIC4.44□□□□□ -1.7
USP47Q96K76 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
USP47Q96K76 RNU4-7P-201ENST00000364758 141 ntBASIC4.44□□□□□ -1.7
USP47Q96K76 AC093084.1-201ENST00000424233 687 ntBASIC4.44□□□□□ -1.7
USP47Q96K76 MTND4LP13-201ENST00000425022 298 ntBASIC4.44□□□□□ -1.7
USP47Q96K76 FAR1P1-201ENST00000427163 934 ntBASIC4.44□□□□□ -1.7
USP47Q96K76 AC022022.1-201ENST00000430304 178 ntBASIC4.44□□□□□ -1.7
USP47Q96K76 RPS3AP43-201ENST00000479743 781 ntBASIC4.44□□□□□ -1.7
USP47Q96K76 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP47Q96K76 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USP47Q96K76 AC097462.2-201ENST00000504623 481 ntBASIC4.44□□□□□ -1.7
USP47Q96K76 AC092851.1-201ENST00000535964 478 ntBASIC4.44□□□□□ -1.7
USP47Q96K76 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.44□□□□□ -1.7
USP47Q96K76 AC087888.1-201ENST00000550884 1254 ntBASIC4.44□□□□□ -1.7
USP47Q96K76 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.44□□□□□ -1.7
USP47Q96K76 FAM60CP-201ENST00000591086 664 ntBASIC4.44□□□□□ -1.7
USP47Q96K76 AC022146.1-201ENST00000595307 847 ntBASIC4.44□□□□□ -1.7
USP47Q96K76 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC4.44□□□□□ -1.7
USP47Q96K76 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
USP47Q96K76 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.44□□□□□ -1.7
USP47Q96K76 PWAR6-201ENST00000552334 4618 ntBASIC4.44□□□□□ -1.7
USP47Q96K76 AL356489.2-201ENST00000566968 3528 ntBASIC4.44□□□□□ -1.7
USP47Q96K76 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.44□□□□□ -1.7
USP47Q96K76 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.44□□□□□ -1.7
USP47Q96K76 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USP47Q96K76 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP47Q96K76 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.43□□□□□ -1.7
USP47Q96K76 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USP47Q96K76 RPL7P26-201ENST00000333817 754 ntBASIC4.43□□□□□ -1.7
USP47Q96K76 SNORA80A-201ENST00000363922 136 ntBASIC4.43□□□□□ -1.7
USP47Q96K76 SKINT1L-201ENST00000401057 817 ntBASIC4.43□□□□□ -1.7
USP47Q96K76 AL353678.1-201ENST00000422735 741 ntBASIC4.43□□□□□ -1.7
USP47Q96K76 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.43□□□□□ -1.7
USP47Q96K76 NANOGNBP1-201ENST00000448444 480 ntBASIC4.43□□□□□ -1.7
USP47Q96K76 AC069277.2-201ENST00000454211 432 ntBASIC4.43□□□□□ -1.7
USP47Q96K76 OR7L1P-201ENST00000456181 380 ntBASIC4.43□□□□□ -1.7
USP47Q96K76 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.43□□□□□ -1.7
USP47Q96K76 AC080014.1-201ENST00000496877 1201 ntBASIC4.43□□□□□ -1.7
USP47Q96K76 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP47Q96K76 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USP47Q96K76 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.43□□□□□ -1.7
USP47Q96K76 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.43□□□□□ -1.7
USP47Q96K76 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.43□□□□□ -1.7
USP47Q96K76 MIR3124-201ENST00000582636 67 ntBASIC4.43□□□□□ -1.7
USP47Q96K76 UBL5P2-201ENST00000583788 219 ntBASIC4.43□□□□□ -1.7
USP47Q96K76 PRELID3BP8-201ENST00000604148 295 ntBASIC4.43□□□□□ -1.7
USP47Q96K76 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USP47Q96K76 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.43□□□□□ -1.7
USP47Q96K76 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.43□□□□□ -1.7
USP47Q96K76 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
USP47Q96K76 AL035425.3-201ENST00000564206 4996 ntBASIC4.42□□□□□ -1.7
USP47Q96K76 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.42□□□□□ -1.7
USP47Q96K76 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.42□□□□□ -1.7
USP47Q96K76 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
USP47Q96K76 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.42□□□□□ -1.7
USP47Q96K76 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.42□□□□□ -1.7
USP47Q96K76 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.42□□□□□ -1.7
USP47Q96K76 RPS12P18-201ENST00000442381 270 ntBASIC4.42□□□□□ -1.7
USP47Q96K76 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.42□□□□□ -1.7
USP47Q96K76 RNU6-319P-201ENST00000516025 108 ntBASIC4.42□□□□□ -1.7
USP47Q96K76 snoU109.6-201ENST00000516831 118 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms