Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 AC027309.2-201ENST00000520566 192 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 DEFB130C-202ENST00000530001 230 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 AC092747.2-201ENST00000545069 983 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 AL109766.1-201ENST00000555080 552 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PTP4A1Q93096 AC122134.1-202ENST00000569111 1201 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 AC244505.7-201ENST00000599675 272 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 AC104785.1-201ENST00000603220 588 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 AC064801.1-201ENST00000612025 407 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 AC007546.1-201ENST00000619452 559 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 AC244517.1-201ENST00000606030 2086 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PTP4A1Q93096 NUP58P1-201ENST00000502546 1738 ntBASIC3.86□□□□□ -1.79
PTP4A1Q93096 AP001148.1-201ENST00000624124 2359 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 OTUD4P1-201ENST00000237841 3067 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTP4A1Q93096 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PTP4A1Q93096 MIR423-201ENST00000362201 94 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 SUGT1P1-201ENST00000379514 476 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 RNU6-629P-201ENST00000384061 103 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 RNU1-89P-201ENST00000384592 164 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTP4A1Q93096 MTND4P3-201ENST00000417829 541 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 TOMM22P1-201ENST00000418578 312 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 USP9YP21-201ENST00000420603 432 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 RPL31P54-201ENST00000429803 370 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 MTCO1P54-201ENST00000430139 712 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 AL132765.1-201ENST00000434165 553 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 AC078785.3-201ENST00000476607 425 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 AK3P4-201ENST00000504283 583 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 HMGB1P22-201ENST00000505315 124 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 AC017037.1-201ENST00000508460 471 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PTP4A1Q93096 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 CDH12P4-201ENST00000517835 295 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 CDH12P3-201ENST00000517935 295 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 CDH12P1-201ENST00000518435 295 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 AC006064.5-201ENST00000541782 248 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 AL445435.1-201ENST00000604232 665 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 AC012603.1-201ENST00000606424 528 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 AC018645.2-201ENST00000609151 472 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 AC008083.4-201ENST00000615076 444 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 AC231759.1-201ENST00000616455 597 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 MFSD8-245ENST00000641743 948 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 AC139713.2-214ENST00000642059 1811 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 ZNF962P-201ENST00000443465 3140 ntBASIC3.85□□□□□ -1.79
PTP4A1Q93096 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PTP4A1Q93096 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTP4A1Q93096 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PTP4A1Q93096 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.84□□□□□ -1.79
PTP4A1Q93096 RNA5SP175-201ENST00000364275 119 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
PTP4A1Q93096 RNU6-398P-201ENST00000384143 109 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 SNORA37-201ENST00000384504 129 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 MIR585-201ENST00000384887 94 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.84□□□□□ -1.79
PTP4A1Q93096 CYB5AP4-201ENST00000396692 399 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 AL079342.2-201ENST00000403367 482 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 RNA5SP129-201ENST00000410276 118 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 RNA5SP306-201ENST00000411087 107 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.84□□□□□ -1.79
PTP4A1Q93096 AC016769.2-201ENST00000414815 475 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 KRR1P1-201ENST00000419430 803 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.84□□□□□ -1.79
PTP4A1Q93096 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.84□□□□□ -1.79
PTP4A1Q93096 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.84□□□□□ -1.79
PTP4A1Q93096 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.84□□□□□ -1.79
PTP4A1Q93096 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.84□□□□□ -1.79
PTP4A1Q93096 AC069528.1-202ENST00000482888 637 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 AC079203.1-201ENST00000487972 404 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 BNIP3P41-201ENST00000503774 571 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 AC004062.1-201ENST00000509926 645 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.84□□□□□ -1.79
PTP4A1Q93096 AC137768.1-201ENST00000549998 553 ntBASIC3.84□□□□□ -1.79
PTP4A1Q93096 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms