Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 GEMIN8P3-201ENST00000445417 720 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 ZNF114P1-201ENST00000453500 292 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 RPL5P32-201ENST00000454085 879 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 RFC5P1-201ENST00000454419 874 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 TPT1P7-201ENST00000458300 517 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 RPL5P24-201ENST00000463742 885 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 RPL7P22-201ENST00000466005 733 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 RPL7AP10-201ENST00000481016 791 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 GAPDHP39-201ENST00000481866 979 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC111000.3-201ENST00000508057 576 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 PPBPP1-201ENST00000510807 373 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 RNU6-416P-201ENST00000516265 103 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC018442.3-201ENST00000523025 183 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC005832.3-201ENST00000537929 631 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 OR6C7P-201ENST00000547875 934 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 CCNG2P1-201ENST00000549521 1000 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AL352979.3-201ENST00000553515 247 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC007954.1-201ENST00000554198 494 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 NIFKP8-201ENST00000560500 874 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC124068.1-201ENST00000563131 678 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 U73023.1-201ENST00000603134 700 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC104785.1-201ENST00000603220 588 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC090186.1-201ENST00000605991 572 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AL031775.1-201ENST00000607014 887 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC109347.2-201ENST00000610220 349 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC010678.1-201ENST00000614118 713 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC008443.7-201ENST00000622195 246 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AC104118.1-201ENST00000607625 1589 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 AL592182.3-201ENST00000642132 3304 ntBASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.31□□□□□ -1.72
ZNF549Q6P9A3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 MTCO1P6-201ENST00000481192 1384 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC012020.1-201ENST00000624541 1728 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC109315.1-201ENST00000584143 1347 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 CCT8P1-201ENST00000413611 1657 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 OR5P1P-201ENST00000299512 925 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 MIR331-201ENST00000362302 94 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 RNU6-398P-201ENST00000384143 109 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 SNORA75-201ENST00000384158 137 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 RNU6-185P-201ENST00000384421 107 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AL356387.2-201ENST00000422272 243 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 DPY19L1P2-201ENST00000426647 915 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC241584.1-201ENST00000438469 1241 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC009263.1-201ENST00000441193 1239 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 COX6CP2-201ENST00000444980 225 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 USP9YP29-201ENST00000445112 563 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 MTCO2P25-201ENST00000447065 681 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AL591363.1-201ENST00000450091 483 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 DNAJC19P8-201ENST00000452887 259 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC109445.1-201ENST00000512356 383 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 RNU6-678P-201ENST00000516832 109 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 PHBP17-201ENST00000528576 541 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC137768.1-201ENST00000549998 553 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC012435.1-202ENST00000568772 240 ntBASIC4.3□□□□□ -1.72
ZNF549Q6P9A3 AC008507.1-201ENST00000587506 734 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms