Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RFX7Q2KHR2 AC091515.1-201ENST00000548110 679 ntBASIC3.9□□□□□ -1.78
RFX7Q2KHR2 AC011492.1-201ENST00000600023 315 ntBASIC3.9□□□□□ -1.78
RFX7Q2KHR2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.9□□□□□ -1.78
RFX7Q2KHR2 AC135507.2-201ENST00000612443 309 ntBASIC3.9□□□□□ -1.78
RFX7Q2KHR2 uc_338.25-201ENST00000613756 156 ntBASIC3.9□□□□□ -1.78
RFX7Q2KHR2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFX7Q2KHR2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RFX7Q2KHR2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.9□□□□□ -1.79
RFX7Q2KHR2 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.89□□□□□ -1.79
RFX7Q2KHR2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 UBA52P6-201ENST00000399822 382 ntBASIC3.89□□□□□ -1.79
RFX7Q2KHR2 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 RPL37P3-201ENST00000456825 293 ntBASIC3.89□□□□□ -1.79
RFX7Q2KHR2 S100A11P2-201ENST00000467589 312 ntBASIC3.89□□□□□ -1.79
RFX7Q2KHR2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 AC080014.1-201ENST00000496877 1201 ntBASIC3.89□□□□□ -1.79
RFX7Q2KHR2 RNA5SP341-201ENST00000516261 117 ntBASIC3.89□□□□□ -1.79
RFX7Q2KHR2 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 AC006518.1-201ENST00000541449 943 ntBASIC3.89□□□□□ -1.79
RFX7Q2KHR2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 MIR4513-201ENST00000581077 86 ntBASIC3.89□□□□□ -1.79
RFX7Q2KHR2 MIR3124-201ENST00000582636 67 ntBASIC3.89□□□□□ -1.79
RFX7Q2KHR2 AL033523.1-201ENST00000605153 153 ntBASIC3.89□□□□□ -1.79
RFX7Q2KHR2 AC138932.5-201ENST00000617759 563 ntBASIC3.89□□□□□ -1.79
RFX7Q2KHR2 AC007529.1-201ENST00000418574 2178 ntBASIC3.89□□□□□ -1.79
RFX7Q2KHR2 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 AC066616.2-201ENST00000559334 1481 ntBASIC3.89□□□□□ -1.79
RFX7Q2KHR2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 SNORA7.4-201ENST00000384249 137 ntBASIC3.89□□□□□ -1.79
RFX7Q2KHR2 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 RPS3AP43-201ENST00000479743 781 ntBASIC3.89□□□□□ -1.79
RFX7Q2KHR2 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 AL121603.1-201ENST00000553815 142 ntBASIC3.89□□□□□ -1.79
RFX7Q2KHR2 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 AC022146.1-201ENST00000595307 847 ntBASIC3.89□□□□□ -1.79
RFX7Q2KHR2 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.89□□□□□ -1.79
RFX7Q2KHR2 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RFX7Q2KHR2 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX7Q2KHR2 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX7Q2KHR2 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RFX7Q2KHR2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
RFX7Q2KHR2 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RFX7Q2KHR2 AL136964.1-201ENST00000622038 2990 ntBASIC3.88□□□□□ -1.79
RFX7Q2KHR2 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX7Q2KHR2 AC099336.2-201ENST00000422457 254 ntBASIC3.88□□□□□ -1.79
RFX7Q2KHR2 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.88□□□□□ -1.79
RFX7Q2KHR2 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX7Q2KHR2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.88□□□□□ -1.79
RFX7Q2KHR2 METTL15P1-201ENST00000481421 1045 ntBASIC3.88□□□□□ -1.79
RFX7Q2KHR2 AC011825.1-201ENST00000484967 388 ntBASIC3.88□□□□□ -1.79
RFX7Q2KHR2 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.88□□□□□ -1.79
RFX7Q2KHR2 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.88□□□□□ -1.79
RFX7Q2KHR2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RFX7Q2KHR2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.88□□□□□ -1.79
RFX7Q2KHR2 SNORD39.2-201ENST00000579995 76 ntBASIC3.88□□□□□ -1.79
RFX7Q2KHR2 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.88□□□□□ -1.79
RFX7Q2KHR2 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
RFX7Q2KHR2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFX7Q2KHR2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFX7Q2KHR2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFX7Q2KHR2 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.87□□□□□ -1.79
RFX7Q2KHR2 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFX7Q2KHR2 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFX7Q2KHR2 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
RFX7Q2KHR2 U3.11-201ENST00000364476 212 ntBASIC3.87□□□□□ -1.79
RFX7Q2KHR2 RNA5SP293-201ENST00000410527 113 ntBASIC3.87□□□□□ -1.79
RFX7Q2KHR2 RNA5SP107-201ENST00000411358 122 ntBASIC3.87□□□□□ -1.79
RFX7Q2KHR2 AL024507.1-201ENST00000412741 274 ntBASIC3.87□□□□□ -1.79
RFX7Q2KHR2 AC245291.1-201ENST00000419501 328 ntBASIC3.87□□□□□ -1.79
RFX7Q2KHR2 AL353678.1-201ENST00000422735 741 ntBASIC3.87□□□□□ -1.79
RFX7Q2KHR2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.87□□□□□ -1.79
RFX7Q2KHR2 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.87□□□□□ -1.79
RFX7Q2KHR2 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.87□□□□□ -1.79
RFX7Q2KHR2 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.87□□□□□ -1.79
RFX7Q2KHR2 CBX3P5-201ENST00000552017 521 ntBASIC3.87□□□□□ -1.79
RFX7Q2KHR2 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.87□□□□□ -1.79
RFX7Q2KHR2 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.87□□□□□ -1.79
RFX7Q2KHR2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
RFX7Q2KHR2 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFX7Q2KHR2 RPL7P26-201ENST00000333817 754 ntBASIC3.86□□□□□ -1.79
RFX7Q2KHR2 RNA5SP383-201ENST00000362934 120 ntBASIC3.86□□□□□ -1.79
RFX7Q2KHR2 RNU6-805P-201ENST00000365643 106 ntBASIC3.86□□□□□ -1.79
RFX7Q2KHR2 RNU6-1263P-201ENST00000384601 106 ntBASIC3.86□□□□□ -1.79
RFX7Q2KHR2 OR2AS1P-201ENST00000427827 319 ntBASIC3.86□□□□□ -1.79
RFX7Q2KHR2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RFX7Q2KHR2 AC006028.1-201ENST00000438379 402 ntBASIC3.86□□□□□ -1.79
RFX7Q2KHR2 NANOGNBP1-201ENST00000448444 480 ntBASIC3.86□□□□□ -1.79
RFX7Q2KHR2 RNU7-170P-201ENST00000459303 61 ntBASIC3.86□□□□□ -1.79
RFX7Q2KHR2 RPS3AP14-201ENST00000483907 780 ntBASIC3.86□□□□□ -1.79
RFX7Q2KHR2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.86□□□□□ -1.79
RFX7Q2KHR2 AC097462.2-201ENST00000504623 481 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms