Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC138969.1-213ENST00000331436 462 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN20P56880 RNU1-130P-201ENST00000363930 160 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 MIR506-201ENST00000384998 124 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CLDN20P56880 ATP5F1P3-201ENST00000397213 657 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AC068533.2-201ENST00000411872 306 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN20P56880 TMSB10P2-201ENST00000416049 131 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN20P56880 UBTFL3-201ENST00000418934 1024 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 PTP4A1P5-201ENST00000420305 455 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 RPL18P10-201ENST00000425606 538 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AC234779.1-201ENST00000425910 285 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AC016712.1-201ENST00000431088 378 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 ELOCP18-201ENST00000434209 337 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AL354941.1-201ENST00000438600 464 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 MTND5P2-201ENST00000442927 1142 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.03□□□□□ -1.76
CLDN20P56880 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN20P56880 RPS27AP17-201ENST00000463344 455 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 UBTFL6-201ENST00000477929 1024 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 RPS26P15-201ENST00000488067 348 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.03□□□□□ -1.76
CLDN20P56880 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN20P56880 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.03□□□□□ -1.76
CLDN20P56880 PGBD4P4-201ENST00000509673 613 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN20P56880 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN20P56880 OR5M7P-201ENST00000526140 972 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AP000790.1-201ENST00000528891 737 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AC009643.1-201ENST00000532030 391 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN20P56880 PDCD5P1-201ENST00000543528 309 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN20P56880 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.03□□□□□ -1.76
CLDN20P56880 AC008015.1-201ENST00000555505 465 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.03□□□□□ -1.76
CLDN20P56880 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.03□□□□□ -1.76
CLDN20P56880 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CLDN20P56880 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.03□□□□□ -1.76
CLDN20P56880 AC011477.5-201ENST00000586571 259 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.03□□□□□ -1.76
CLDN20P56880 AC090181.2-201ENST00000602975 672 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 BPIFA4P-203ENST00000603168 689 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AC103792.1-201ENST00000603591 919 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AC091946.2-201ENST00000606105 291 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AC008966.2-201ENST00000606157 453 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.03□□□□□ -1.76
CLDN20P56880 MIR378J-201ENST00000611988 109 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AL139418.1-201ENST00000613613 177 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AL138721.1-201ENST00000616756 179 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN20P56880 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CLDN20P56880 AC098679.5-201ENST00000624394 571 ntBASIC4.03□□□□□ -1.76
CLDN20P56880 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.03□□□□□ -1.76
CLDN20P56880 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.03□□□□□ -1.76
CLDN20P56880 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN20P56880 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN20P56880 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN20P56880 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN20P56880 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN20P56880 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
CLDN20P56880 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN20P56880 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLDN20P56880 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
CLDN20P56880 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
CLDN20P56880 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CLDN20P56880 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 NXPH1-205ENST00000602349 1953 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
CLDN20P56880 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN20P56880 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CLDN20P56880 OR4A15-201ENST00000314706 1035 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 RNU6-931P-201ENST00000363850 107 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 RNA5SP151-201ENST00000365632 117 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.02□□□□□ -1.77
CLDN20P56880 AL356387.2-201ENST00000422272 243 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN20P56880 MTND4P20-201ENST00000424125 869 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 UBE2V1P1-201ENST00000430836 445 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 AL365396.1-201ENST00000430854 671 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN20P56880 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN20P56880 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN20P56880 AL357520.1-201ENST00000441557 453 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.02□□□□□ -1.77
CLDN20P56880 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN20P56880 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.02□□□□□ -1.77
CLDN20P56880 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.02□□□□□ -1.77
CLDN20P56880 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.02□□□□□ -1.77
CLDN20P56880 PARP4P3-201ENST00000510265 317 ntBASIC4.02□□□□□ -1.77
CLDN20P56880 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CLDN20P56880 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.02□□□□□ -1.77
CLDN20P56880 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN20P56880 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.02□□□□□ -1.77
CLDN20P56880 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLDN20P56880 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.02□□□□□ -1.77
CLDN20P56880 AC084757.1-201ENST00000559987 490 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms