Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AC016691.1-201ENST00000441321 413 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.09□□□□□ -1.59
GFRA1P56159 AC104651.2-201ENST00000447549 528 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.09□□□□□ -1.59
GFRA1P56159 AC002553.2-201ENST00000453217 340 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 SNRPCP3-201ENST00000474888 476 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 COX7A2P2-201ENST00000505291 250 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 RNA5SP362-201ENST00000516048 118 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 IGLV3-24-201ENST00000517477 197 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 OR5BC1P-201ENST00000529327 739 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.09□□□□□ -1.59
GFRA1P56159 MIR4311-201ENST00000580794 100 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 AC011712.1-201ENST00000588959 234 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.09□□□□□ -1.59
GFRA1P56159 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.09□□□□□ -1.59
GFRA1P56159 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.09□□□□□ -1.59
GFRA1P56159 MIR6886-201ENST00000619864 61 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 AP001005.3-201ENST00000622049 129 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 AC112204.3-201ENST00000623822 332 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
GFRA1P56159 AC099654.10-201ENST00000640395 161 ntBASIC5.09□□□□□ -1.59
GFRA1P56159 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.09□□□□□ -1.59
GFRA1P56159 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GFRA1P56159 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.09□□□□□ -1.59
GFRA1P56159 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
GFRA1P56159 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
GFRA1P56159 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.09□□□□□ -1.6
GFRA1P56159 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
GFRA1P56159 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
GFRA1P56159 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.09□□□□□ -1.6
GFRA1P56159 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
GFRA1P56159 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
GFRA1P56159 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.09□□□□□ -1.6
GFRA1P56159 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GFRA1P56159 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
GFRA1P56159 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.08□□□□□ -1.6
GFRA1P56159 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GFRA1P56159 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
GFRA1P56159 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
GFRA1P56159 AC005332.5-201ENST00000591222 2919 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
GFRA1P56159 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
GFRA1P56159 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
GFRA1P56159 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
GFRA1P56159 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GFRA1P56159 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
GFRA1P56159 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
GFRA1P56159 Y_RNA.157-201ENST00000363638 102 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 RNU5A-8P-201ENST00000364102 114 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 RNA5SP132-201ENST00000364725 118 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
GFRA1P56159 RNU2-62P-201ENST00000410868 191 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 RWDD4P2-201ENST00000426392 563 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 ATP5JP1-201ENST00000431631 322 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 OR52B5P-201ENST00000435337 951 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 RPL12P46-201ENST00000436610 195 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 KRT8P51-201ENST00000438938 274 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.08□□□□□ -1.6
GFRA1P56159 BX276092.4-201ENST00000452056 248 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 RPL12P39-201ENST00000455456 496 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 RNU7-63P-201ENST00000459054 62 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
GFRA1P56159 RPL39P36-201ENST00000490784 156 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 AL139099.1-201ENST00000497398 403 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 AC021146.1-201ENST00000511202 716 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 AC010486.1-201ENST00000511793 424 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.08□□□□□ -1.6
GFRA1P56159 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.08□□□□□ -1.6
GFRA1P56159 MRPS21P7-201ENST00000566937 238 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.08□□□□□ -1.6
GFRA1P56159 MIR4512-201ENST00000583257 77 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 AL590099.1-201ENST00000615276 138 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 AC022106.2-201ENST00000620114 757 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.08□□□□□ -1.6
GFRA1P56159 MTND1P37-201ENST00000636562 264 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GFRA1P56159 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GFRA1P56159 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GFRA1P56159 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GFRA1P56159 AC087516.1-201ENST00000561236 2428 ntBASIC5.08□□□□□ -1.6
GFRA1P56159 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GFRA1P56159 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.08□□□□□ -1.6
GFRA1P56159 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.08□□□□□ -1.6
GFRA1P56159 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GFRA1P56159 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.08□□□□□ -1.6
GFRA1P56159 ZNF734P-201ENST00000419494 1534 ntBASIC5.07□□□□□ -1.6
GFRA1P56159 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
GFRA1P56159 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
GFRA1P56159 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
GFRA1P56159 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
GFRA1P56159 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.07□□□□□ -1.6
GFRA1P56159 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.07□□□□□ -1.6
GFRA1P56159 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GFRA1P56159 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
GFRA1P56159 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GFRA1P56159 AC140134.1-201ENST00000511830 3544 ntBASIC5.07□□□□□ -1.6
GFRA1P56159 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
GFRA1P56159 RNU6-223P-201ENST00000362830 107 ntBASIC5.07□□□□□ -1.6
GFRA1P56159 SNORA51.1-201ENST00000363243 140 ntBASIC5.07□□□□□ -1.6
GFRA1P56159 Y_RNA.356-201ENST00000365475 113 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms