Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AL035410.1-201ENST00000427409 427 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NR1H2P55055 AL008629.1-201ENST00000438615 184 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.42□□□□□ -1.7
NR1H2P55055 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.42□□□□□ -1.7
NR1H2P55055 AL137845.2-201ENST00000444292 988 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.42□□□□□ -1.7
NR1H2P55055 ANKRD26P4-201ENST00000455755 950 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 HMGB3P30-201ENST00000457863 606 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 SCARNA10-201ENST00000459255 330 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 PLGLA-201ENST00000465668 449 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 AL136126.1-201ENST00000473603 402 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 RPL7P38-201ENST00000488396 739 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.42□□□□□ -1.7
NR1H2P55055 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NR1H2P55055 IGKV2D-36-201ENST00000518643 226 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.42□□□□□ -1.7
NR1H2P55055 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.42□□□□□ -1.7
NR1H2P55055 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.42□□□□□ -1.7
NR1H2P55055 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NR1H2P55055 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NR1H2P55055 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.42□□□□□ -1.7
NR1H2P55055 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.42□□□□□ -1.7
NR1H2P55055 HSPE1P3-201ENST00000559254 309 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.42□□□□□ -1.7
NR1H2P55055 BGLT3-201ENST00000564523 994 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 AC107954.1-201ENST00000565906 727 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.42□□□□□ -1.7
NR1H2P55055 AC015912.2-201ENST00000571053 181 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 MIR4697-201ENST00000582977 78 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.42□□□□□ -1.7
NR1H2P55055 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.42□□□□□ -1.7
NR1H2P55055 AC068790.5-201ENST00000602741 355 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 AC008745.1-201ENST00000604064 271 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 AC243773.3-201ENST00000613270 256 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 AC090246.1-201ENST00000616499 426 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 AC092650.2-201ENST00000619984 902 ntBASIC4.42□□□□□ -1.7
NR1H2P55055 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.42□□□□□ -1.7
NR1H2P55055 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NR1H2P55055 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NR1H2P55055 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.42□□□□□ -1.7
NR1H2P55055 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NR1H2P55055 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
NR1H2P55055 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NR1H2P55055 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
NR1H2P55055 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.41□□□□□ -1.7
NR1H2P55055 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H2P55055 A2MP1-204ENST00000566278 4130 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H2P55055 AC012020.1-201ENST00000624541 1728 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H2P55055 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H2P55055 AC105074.1-201ENST00000623380 3095 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.41□□□□□ -1.7
NR1H2P55055 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H2P55055 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.41□□□□□ -1.7
NR1H2P55055 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.41□□□□□ -1.7
NR1H2P55055 RN7SKP95-201ENST00000362860 303 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 RNA5SP428-201ENST00000365129 132 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
NR1H2P55055 RNA5SP87-201ENST00000384155 118 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 RNU6-878P-201ENST00000384578 110 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NR1H2P55055 VN1R8P-201ENST00000407739 893 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 RNA5SP56-201ENST00000410277 118 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.41□□□□□ -1.7
NR1H2P55055 AC012065.2-201ENST00000421295 375 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.41□□□□□ -1.7
NR1H2P55055 AC092832.1-201ENST00000422934 400 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 AL049610.1-201ENST00000423374 372 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.41□□□□□ -1.7
NR1H2P55055 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H2P55055 RHOT1P3-201ENST00000436571 331 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.41□□□□□ -1.7
NR1H2P55055 GSTA7P-201ENST00000438425 448 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.41□□□□□ -1.7
NR1H2P55055 SETD6P1-201ENST00000444575 317 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC4.41□□□□□ -1.7
NR1H2P55055 MTND2P19-201ENST00000449129 1012 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 RPL26P28-201ENST00000451325 435 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 AC133473.1-201ENST00000455173 299 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 NDUFA12P1-201ENST00000455914 406 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H2P55055 RPL7P18-201ENST00000478965 734 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 RN7SL319P-201ENST00000480656 221 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.41□□□□□ -1.7
NR1H2P55055 BTF3P13-201ENST00000513224 490 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 HNRNPKP5-201ENST00000515300 253 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 RNA5SP446-201ENST00000515955 82 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 RNU6-583P-201ENST00000516012 92 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 AC090281.1-201ENST00000523019 276 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.41□□□□□ -1.7
NR1H2P55055 AP000926.4-201ENST00000527351 454 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 AP003461.1-201ENST00000528866 78 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.41□□□□□ -1.7
NR1H2P55055 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.41□□□□□ -1.7
NR1H2P55055 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.41□□□□□ -1.7
NR1H2P55055 AL592221.1-201ENST00000605266 382 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms