Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.03□□□□□ -1.92
SRP9P49458 AC026403.1-201ENST00000518938 295 ntBASIC3.03□□□□□ -1.92
SRP9P49458 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.03□□□□□ -1.92
SRP9P49458 OR8I1P-201ENST00000529291 931 ntBASIC3.03□□□□□ -1.92
SRP9P49458 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.03□□□□□ -1.92
SRP9P49458 AC087888.1-201ENST00000550884 1254 ntBASIC3.03□□□□□ -1.92
SRP9P49458 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.03□□□□□ -1.92
SRP9P49458 AC019176.2-201ENST00000611579 315 ntBASIC3.03□□□□□ -1.92
SRP9P49458 AC039056.2-201ENST00000622261 511 ntBASIC3.03□□□□□ -1.92
SRP9P49458 AC110801.1-201ENST00000623590 212 ntBASIC3.03□□□□□ -1.92
SRP9P49458 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.03□□□□□ -1.92
SRP9P49458 AL355578.1-201ENST00000607405 1328 ntBASIC3.02□□□□□ -1.93
SRP9P49458 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.02□□□□□ -1.93
SRP9P49458 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.02□□□□□ -1.93
SRP9P49458 MFSD8-233ENST00000641482 4860 ntBASIC3.02□□□□□ -1.93
SRP9P49458 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SRP9P49458 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
SRP9P49458 RNU1-85P-201ENST00000364127 164 ntBASIC3.02□□□□□ -1.93
SRP9P49458 RNU2-65P-201ENST00000410162 185 ntBASIC3.02□□□□□ -1.93
SRP9P49458 RPL31P2-201ENST00000413849 377 ntBASIC3.02□□□□□ -1.93
SRP9P49458 RPS29P4-201ENST00000414733 161 ntBASIC3.02□□□□□ -1.93
SRP9P49458 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.02□□□□□ -1.93
SRP9P49458 AL050321.1-201ENST00000432363 400 ntBASIC3.02□□□□□ -1.93
SRP9P49458 HSPD1P21-201ENST00000436541 245 ntBASIC3.02□□□□□ -1.93
SRP9P49458 HMGN2P20-201ENST00000437531 273 ntBASIC3.02□□□□□ -1.93
SRP9P49458 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.02□□□□□ -1.93
SRP9P49458 SNORA84-201ENST00000459229 133 ntBASIC3.02□□□□□ -1.93
SRP9P49458 RPL23AP12-201ENST00000467573 473 ntBASIC3.02□□□□□ -1.93
SRP9P49458 RPS26P21-201ENST00000475397 348 ntBASIC3.02□□□□□ -1.93
SRP9P49458 AC005726.1-201ENST00000494679 427 ntBASIC3.02□□□□□ -1.93
SRP9P49458 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.02□□□□□ -1.93
SRP9P49458 SNORA70.19-201ENST00000516717 90 ntBASIC3.02□□□□□ -1.93
SRP9P49458 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.02□□□□□ -1.93
SRP9P49458 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.02□□□□□ -1.93
SRP9P49458 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.02□□□□□ -1.93
SRP9P49458 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.02□□□□□ -1.93
SRP9P49458 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.02□□□□□ -1.93
SRP9P49458 MTCO3P24-201ENST00000572729 782 ntBASIC3.02□□□□□ -1.93
SRP9P49458 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.02□□□□□ -1.93
SRP9P49458 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.02□□□□□ -1.93
SRP9P49458 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.02□□□□□ -1.93
SRP9P49458 AC245389.1-201ENST00000605141 529 ntBASIC3.02□□□□□ -1.93
SRP9P49458 AC012442.3-202ENST00000636742 206 ntBASIC3.02□□□□□ -1.93
SRP9P49458 AC009093.8-201ENST00000641769 292 ntBASIC3.02□□□□□ -1.93
SRP9P49458 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
SRP9P49458 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SRP9P49458 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.02□□□□□ -1.93
SRP9P49458 AC093010.3-201ENST00000570269 15214 ntBASIC3.02□□□□□ -1.93
SRP9P49458 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
SRP9P49458 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SRP9P49458 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SRP9P49458 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SRP9P49458 AC117529.2-201ENST00000512159 2068 ntBASIC3.01□□□□□ -1.93
SRP9P49458 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SRP9P49458 RNA5SP383-201ENST00000362934 120 ntBASIC3.01□□□□□ -1.93
SRP9P49458 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SRP9P49458 SAR1AP2-201ENST00000392696 594 ntBASIC3.01□□□□□ -1.93
SRP9P49458 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.01□□□□□ -1.93
SRP9P49458 AC004987.3-201ENST00000413879 771 ntBASIC3.01□□□□□ -1.93
SRP9P49458 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.01□□□□□ -1.93
SRP9P49458 AC012498.1-201ENST00000424037 437 ntBASIC3.01□□□□□ -1.93
SRP9P49458 RPL23AP82-202ENST00000427528 469 ntBASIC3.01□□□□□ -1.93
SRP9P49458 CYCSP4-201ENST00000429682 331 ntBASIC3.01□□□□□ -1.93
SRP9P49458 OR2B8P-201ENST00000432841 938 ntBASIC3.01□□□□□ -1.93
SRP9P49458 GOT2P5-201ENST00000433995 546 ntBASIC3.01□□□□□ -1.93
SRP9P49458 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.01□□□□□ -1.93
SRP9P49458 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.01□□□□□ -1.93
SRP9P49458 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.01□□□□□ -1.93
SRP9P49458 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.01□□□□□ -1.93
SRP9P49458 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.01□□□□□ -1.93
SRP9P49458 CENPBD1P1-201ENST00000464061 469 ntBASIC3.01□□□□□ -1.93
SRP9P49458 RN7SL594P-201ENST00000470590 287 ntBASIC3.01□□□□□ -1.93
SRP9P49458 OR5H3P-201ENST00000502817 919 ntBASIC3.01□□□□□ -1.93
SRP9P49458 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.01□□□□□ -1.93
SRP9P49458 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC3.01□□□□□ -1.93
SRP9P49458 IGKV2D-19-201ENST00000523346 262 ntBASIC3.01□□□□□ -1.93
SRP9P49458 AC103843.2-201ENST00000530523 682 ntBASIC3.01□□□□□ -1.93
SRP9P49458 GTF2IP22-201ENST00000554443 182 ntBASIC3.01□□□□□ -1.93
SRP9P49458 OR4U1P-201ENST00000554958 912 ntBASIC3.01□□□□□ -1.93
SRP9P49458 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.01□□□□□ -1.93
SRP9P49458 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.01□□□□□ -1.93
SRP9P49458 AC034268.2-201ENST00000571784 482 ntBASIC3.01□□□□□ -1.93
SRP9P49458 MIR4474-201ENST00000579189 78 ntBASIC3.01□□□□□ -1.93
SRP9P49458 MIR3158-1-201ENST00000583596 81 ntBASIC3.01□□□□□ -1.93
SRP9P49458 MIR4506-201ENST00000584693 77 ntBASIC3.01□□□□□ -1.93
SRP9P49458 AC112503.1-201ENST00000608436 391 ntBASIC3.01□□□□□ -1.93
SRP9P49458 AC006133.1-201ENST00000617106 264 ntBASIC3.01□□□□□ -1.93
SRP9P49458 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.01□□□□□ -1.93
SRP9P49458 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.01□□□□□ -1.93
SRP9P49458 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SRP9P49458 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SRP9P49458 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3□□□□□ -1.93
SRP9P49458 AL365440.1-201ENST00000436135 2167 ntBASIC3□□□□□ -1.93
SRP9P49458 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
SRP9P49458 RPL7P26-201ENST00000333817 754 ntBASIC3□□□□□ -1.93
SRP9P49458 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3□□□□□ -1.93
SRP9P49458 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SRP9P49458 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3□□□□□ -1.93
SRP9P49458 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3□□□□□ -1.93
SRP9P49458 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms