Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXA11P31270 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA11P31270 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA11P31270 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA11P31270 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA11P31270 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HOXA11P31270 AC025125.1-201ENST00000624743 1922 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXA11P31270 RPL21P65-201ENST00000406094 466 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 MIR1179-201ENST00000408703 91 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXA11P31270 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXA11P31270 FO393419.3-201ENST00000428741 282 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXA11P31270 MTND1P32-201ENST00000433043 938 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXA11P31270 AC006011.1-201ENST00000442758 349 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 AC097499.1-201ENST00000444277 208 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA11P31270 TPTE2P6-202ENST00000445572 1007 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 AC068135.1-201ENST00000446164 246 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA11P31270 AC097262.1-201ENST00000452559 548 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 AL645939.1-201ENST00000453429 797 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 CDC42P1-201ENST00000456658 548 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXA11P31270 AC113347.3-201ENST00000509113 148 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 MTCO2P32-201ENST00000514865 403 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 HMGB1P19-201ENST00000517578 577 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXA11P31270 MTCO3P15-201ENST00000526563 574 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXA11P31270 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXA11P31270 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXA11P31270 AC007599.1-201ENST00000568688 1174 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXA11P31270 AC093227.2-201ENST00000589357 285 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXA11P31270 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXA11P31270 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA11P31270 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXA11P31270 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA11P31270 MRPS35P3-201ENST00000603189 709 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXA11P31270 AC135507.1-201ENST00000607214 561 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 AL354976.1-201ENST00000613843 387 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 AC079248.2-201ENST00000623779 326 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA11P31270 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXA11P31270 PNPT1P2-201ENST00000456768 2050 ntBASIC4.53□□□□□ -1.68
HOXA11P31270 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXA11P31270 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA11P31270 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
HOXA11P31270 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
HOXA11P31270 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
HOXA11P31270 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
HOXA11P31270 AC111188.2-201ENST00000529697 1387 ntBASIC4.53□□□□□ -1.69
HOXA11P31270 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HOXA11P31270 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
HOXA11P31270 ZNF542P-204ENST00000482727 1305 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 AC116667.1-201ENST00000604855 2072 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXA11P31270 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
HOXA11P31270 RNA5SP27-201ENST00000363839 119 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 RNU6-353P-201ENST00000364266 108 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 U3.15-201ENST00000365398 212 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 RNU6-413P-201ENST00000384115 107 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 AP000357.1-201ENST00000409926 1165 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 BTF3L4P1-201ENST00000413813 468 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA11P31270 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA11P31270 AC114814.2-201ENST00000419195 485 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 RPS12P5-201ENST00000423449 371 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA11P31270 MUPP-201ENST00000438111 566 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 RPL23AP46-201ENST00000438548 490 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA11P31270 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA11P31270 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXA11P31270 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA11P31270 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA11P31270 RPS27AP8-201ENST00000452665 445 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA11P31270 AC108734.3-201ENST00000481241 1165 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 DEFB109F-201ENST00000491870 277 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 HMGB1P21-201ENST00000502313 581 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 FTH1P24-201ENST00000503502 462 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXA11P31270 MTCYBP16-201ENST00000509187 1129 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 OR5H4P-201ENST00000510851 923 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 FTH1P21-201ENST00000512179 511 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 AC134698.5-201ENST00000519444 336 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA11P31270 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXA11P31270 NBEAP1-201ENST00000554452 979 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXA11P31270 AC103987.3-201ENST00000582071 292 ntBASIC4.52□□□□□ -1.69
HOXA11P31270 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.52□□□□□ -1.69
HOXA11P31270 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms