Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.81□□□□□ -1.64
CLIP1P30622 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.81□□□□□ -1.64
CLIP1P30622 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.81□□□□□ -1.64
CLIP1P30622 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLIP1P30622 EEF1A1P41-201ENST00000414667 207 ntBASIC4.8□□□□□ -1.64
CLIP1P30622 AC000041.1-201ENST00000439655 175 ntBASIC4.8□□□□□ -1.64
CLIP1P30622 MIR3162-201ENST00000581818 82 ntBASIC4.8□□□□□ -1.64
CLIP1P30622 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.8□□□□□ -1.64
CLIP1P30622 AC007998.5-201ENST00000622938 237 ntBASIC4.8□□□□□ -1.64
CLIP1P30622 AC019080.5-201ENST00000624891 757 ntBASIC4.8□□□□□ -1.64
CLIP1P30622 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP1P30622 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CLIP1P30622 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP1P30622 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP1P30622 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP1P30622 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP1P30622 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLIP1P30622 AL672296.1-201ENST00000427780 2158 ntBASIC4.8□□□□□ -1.64
CLIP1P30622 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CLIP1P30622 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CLIP1P30622 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLIP1P30622 AL139281.1-201ENST00000422120 335 ntBASIC4.8□□□□□ -1.64
CLIP1P30622 HMGB3P6-201ENST00000444896 598 ntBASIC4.8□□□□□ -1.64
CLIP1P30622 VN1R104P-201ENST00000505115 1009 ntBASIC4.8□□□□□ -1.64
CLIP1P30622 AC026801.2-201ENST00000515352 425 ntBASIC4.8□□□□□ -1.64
CLIP1P30622 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.8□□□□□ -1.64
CLIP1P30622 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.8□□□□□ -1.64
CLIP1P30622 AC022146.1-201ENST00000595307 847 ntBASIC4.8□□□□□ -1.64
CLIP1P30622 AC025946.2-201ENST00000603398 234 ntBASIC4.8□□□□□ -1.64
CLIP1P30622 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.8□□□□□ -1.64
CLIP1P30622 AC007318.2-201ENST00000620999 243 ntBASIC4.8□□□□□ -1.64
CLIP1P30622 SRP72P2-201ENST00000344851 1979 ntBASIC4.79□□□□□ -1.64
CLIP1P30622 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.79□□□□□ -1.64
CLIP1P30622 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC4.79□□□□□ -1.64
CLIP1P30622 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
CLIP1P30622 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CLIP1P30622 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CLIP1P30622 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CLIP1P30622 RNA5SP107-201ENST00000411358 122 ntBASIC4.79□□□□□ -1.64
CLIP1P30622 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.79□□□□□ -1.64
CLIP1P30622 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.79□□□□□ -1.64
CLIP1P30622 RPL23AP22-201ENST00000437556 453 ntBASIC4.79□□□□□ -1.64
CLIP1P30622 AC027309.2-201ENST00000520566 192 ntBASIC4.79□□□□□ -1.64
CLIP1P30622 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.79□□□□□ -1.64
CLIP1P30622 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.79□□□□□ -1.64
CLIP1P30622 AC087276.1-201ENST00000529659 480 ntBASIC4.79□□□□□ -1.64
CLIP1P30622 CYCSP41-201ENST00000616920 296 ntBASIC4.79□□□□□ -1.64
CLIP1P30622 SAGE4P-201ENST00000442271 3381 ntBASIC4.79□□□□□ -1.64
CLIP1P30622 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLIP1P30622 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.78□□□□□ -1.64
CLIP1P30622 AC105272.1-201ENST00000438604 198 ntBASIC4.78□□□□□ -1.64
CLIP1P30622 AL135938.1-201ENST00000443141 297 ntBASIC4.78□□□□□ -1.64
CLIP1P30622 AC112492.1-201ENST00000449607 712 ntBASIC4.78□□□□□ -1.64
CLIP1P30622 RNU6-1231P-201ENST00000517185 103 ntBASIC4.78□□□□□ -1.64
CLIP1P30622 AC092851.1-201ENST00000535964 478 ntBASIC4.78□□□□□ -1.64
CLIP1P30622 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.78□□□□□ -1.64
CLIP1P30622 GTF3AP2-201ENST00000557014 266 ntBASIC4.78□□□□□ -1.64
CLIP1P30622 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.78□□□□□ -1.64
CLIP1P30622 AL591516.1-201ENST00000611326 274 ntBASIC4.78□□□□□ -1.64
CLIP1P30622 AC096644.4-201ENST00000563417 2912 ntBASIC4.78□□□□□ -1.64
CLIP1P30622 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP1P30622 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP1P30622 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP1P30622 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP1P30622 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLIP1P30622 OR52B1P-201ENST00000316506 909 ntBASIC4.77□□□□□ -1.65
CLIP1P30622 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.77□□□□□ -1.65
CLIP1P30622 AL450263.2-201ENST00000439400 589 ntBASIC4.77□□□□□ -1.65
CLIP1P30622 RPS4XP13-201ENST00000483219 789 ntBASIC4.77□□□□□ -1.65
CLIP1P30622 RPL5P23-201ENST00000496040 868 ntBASIC4.77□□□□□ -1.65
CLIP1P30622 SNORA64.4-201ENST00000516632 81 ntBASIC4.77□□□□□ -1.65
CLIP1P30622 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.77□□□□□ -1.65
CLIP1P30622 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.77□□□□□ -1.65
CLIP1P30622 AL592494.2-201ENST00000425455 1548 ntBASIC4.77□□□□□ -1.65
CLIP1P30622 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP1P30622 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.76□□□□□ -1.65
CLIP1P30622 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.76□□□□□ -1.65
CLIP1P30622 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.76□□□□□ -1.65
CLIP1P30622 KC877373.1-201ENST00000479066 408 ntBASIC4.76□□□□□ -1.65
CLIP1P30622 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.76□□□□□ -1.65
CLIP1P30622 RN7SKP272-201ENST00000516988 232 ntBASIC4.76□□□□□ -1.65
CLIP1P30622 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.76□□□□□ -1.65
CLIP1P30622 AC015871.2-201ENST00000603605 948 ntBASIC4.76□□□□□ -1.65
CLIP1P30622 AC016590.3-201ENST00000611171 753 ntBASIC4.76□□□□□ -1.65
CLIP1P30622 AC004944.1-201ENST00000517807 3059 ntBASIC4.76□□□□□ -1.65
CLIP1P30622 AC092435.3-201ENST00000565538 3654 ntBASIC4.76□□□□□ -1.65
CLIP1P30622 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLIP1P30622 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CLIP1P30622 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.76□□□□□ -1.65
CLIP1P30622 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.75□□□□□ -1.65
CLIP1P30622 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CLIP1P30622 OR5J1P-201ENST00000313544 939 ntBASIC4.75□□□□□ -1.65
CLIP1P30622 ARF4P3-201ENST00000397387 509 ntBASIC4.75□□□□□ -1.65
CLIP1P30622 RPL31P12-201ENST00000422587 358 ntBASIC4.75□□□□□ -1.65
CLIP1P30622 OR2AS1P-201ENST00000427827 319 ntBASIC4.75□□□□□ -1.65
CLIP1P30622 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.75□□□□□ -1.65
CLIP1P30622 AC093156.1-201ENST00000440382 670 ntBASIC4.75□□□□□ -1.65
CLIP1P30622 PRELID3BP6-201ENST00000503839 571 ntBASIC4.75□□□□□ -1.65
CLIP1P30622 OR5G4P-201ENST00000525251 760 ntBASIC4.75□□□□□ -1.65
CLIP1P30622 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms