Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 AL583835.1-201ENST00000399570 407 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 AC009237.5-201ENST00000414271 501 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 LIPT1P1-201ENST00000415870 1186 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.72□□□□□ -1.81
HOXD4P09016 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXD4P09016 AL138785.1-201ENST00000425821 331 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 PRELID3BP10-201ENST00000431957 584 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 AL356535.1-201ENST00000440335 398 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.72□□□□□ -1.81
HOXD4P09016 AL353093.1-201ENST00000441292 436 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXD4P09016 ABCF2P2-201ENST00000450549 296 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXD4P09016 AL035407.2-201ENST00000454090 378 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 RNU7-170P-201ENST00000459303 61 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 RPL7L1P8-201ENST00000469911 741 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 AC068587.2-201ENST00000478386 781 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 MTCO3P35-201ENST00000485582 781 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 AC025554.1-201ENST00000505641 188 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXD4P09016 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.72□□□□□ -1.81
HOXD4P09016 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXD4P09016 SNORA70.14-201ENST00000516205 110 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 RN7SKP287-201ENST00000516546 266 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXD4P09016 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.72□□□□□ -1.81
HOXD4P09016 NARSP2-201ENST00000518524 679 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXD4P09016 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXD4P09016 LRRC34P1-201ENST00000542742 915 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 AC025260.1-201ENST00000548858 430 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.72□□□□□ -1.81
HOXD4P09016 AC079171.1-201ENST00000568788 914 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 MTND4LP24-201ENST00000572277 291 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 RN7SL703P-201ENST00000578485 302 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXD4P09016 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.72□□□□□ -1.81
HOXD4P09016 NF1P5-201ENST00000588287 448 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.72□□□□□ -1.81
HOXD4P09016 AC234772.3-201ENST00000602277 528 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 AC008739.3-201ENST00000603262 127 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 AC093424.1-201ENST00000604999 338 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 MIR486-1-201ENST00000612171 68 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 AC006386.1-201ENST00000619436 415 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 AC008013.2-202ENST00000637965 364 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXD4P09016 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.72□□□□□ -1.81
HOXD4P09016 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HOXD4P09016 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
HOXD4P09016 AC007529.1-201ENST00000418574 2178 ntBASIC3.72□□□□□ -1.81
HOXD4P09016 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HOXD4P09016 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.72□□□□□ -1.81
HOXD4P09016 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
HOXD4P09016 SEPT7P7-201ENST00000420492 1301 ntBASIC3.71□□□□□ -1.81
HOXD4P09016 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
HOXD4P09016 SAGE2P-201ENST00000420011 2126 ntBASIC3.71□□□□□ -1.81
HOXD4P09016 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
HOXD4P09016 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
HOXD4P09016 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXD4P09016 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXD4P09016 EXOC5P1-201ENST00000510543 1969 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXD4P09016 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXD4P09016 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXD4P09016 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
HOXD4P09016 AL139811.1-201ENST00000424779 2299 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 RNU6-543P-201ENST00000362576 108 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXD4P09016 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HOXD4P09016 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXD4P09016 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXD4P09016 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXD4P09016 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXD4P09016 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HOXD4P09016 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXD4P09016 AC246680.2-201ENST00000422106 389 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 AC092447.3-201ENST00000426027 686 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 AC017083.1-201ENST00000428093 483 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 GTF2IP3-201ENST00000433887 494 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 AL356276.2-201ENST00000435919 558 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 RPS29P7-201ENST00000439662 171 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXD4P09016 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
HOXD4P09016 RPL7P31-201ENST00000450192 724 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.71□□□□□ -1.82
HOXD4P09016 RPL36AP13-201ENST00000457490 317 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 SNORD11.1-201ENST00000459482 85 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 AC023050.1-201ENST00000498198 304 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 AC021146.5-201ENST00000503544 545 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 FTH1P21-201ENST00000512179 511 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 NDUFS5P6-201ENST00000529136 295 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HOXD4P09016 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXD4P09016 POLR2KP1-201ENST00000553226 168 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.71□□□□□ -1.82
HOXD4P09016 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.71□□□□□ -1.82
HOXD4P09016 AC024220.1-201ENST00000603675 484 ntBASIC3.71□□□□□ -1.82
HOXD4P09016 AC068313.1-201ENST00000604028 1008 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms