Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.79□□□□□ -1.64
MBD4O95243 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
MBD4O95243 AC017037.1-201ENST00000508460 471 ntBASIC4.79□□□□□ -1.64
MBD4O95243 AC006499.6-201ENST00000511169 607 ntBASIC4.79□□□□□ -1.64
MBD4O95243 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.79□□□□□ -1.64
MBD4O95243 RNU6-885P-201ENST00000516607 104 ntBASIC4.79□□□□□ -1.64
MBD4O95243 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
MBD4O95243 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.79□□□□□ -1.64
MBD4O95243 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.79□□□□□ -1.64
MBD4O95243 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.79□□□□□ -1.64
MBD4O95243 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.79□□□□□ -1.64
MBD4O95243 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
MBD4O95243 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.79□□□□□ -1.64
MBD4O95243 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.79□□□□□ -1.64
MBD4O95243 AC093519.1-201ENST00000566109 298 ntBASIC4.79□□□□□ -1.64
MBD4O95243 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.79□□□□□ -1.64
MBD4O95243 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.79□□□□□ -1.64
MBD4O95243 AL445435.1-201ENST00000604232 665 ntBASIC4.79□□□□□ -1.64
MBD4O95243 AL592436.1-201ENST00000605135 558 ntBASIC4.79□□□□□ -1.64
MBD4O95243 HSPE1P14-201ENST00000605812 302 ntBASIC4.79□□□□□ -1.64
MBD4O95243 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.79□□□□□ -1.64
MBD4O95243 AC026368.1-201ENST00000614934 690 ntBASIC4.79□□□□□ -1.64
MBD4O95243 AC123767.1-202ENST00000620407 817 ntBASIC4.79□□□□□ -1.64
MBD4O95243 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.79□□□□□ -1.64
MBD4O95243 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MBD4O95243 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.79□□□□□ -1.64
MBD4O95243 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.79□□□□□ -1.64
MBD4O95243 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MBD4O95243 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
MBD4O95243 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MBD4O95243 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MBD4O95243 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
MBD4O95243 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
MBD4O95243 AL356489.2-201ENST00000566968 3528 ntBASIC4.78□□□□□ -1.64
MBD4O95243 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
MBD4O95243 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MBD4O95243 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
MBD4O95243 RNU1-85P-201ENST00000364127 164 ntBASIC4.78□□□□□ -1.64
MBD4O95243 RNU6-921P-201ENST00000384361 107 ntBASIC4.78□□□□□ -1.64
MBD4O95243 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.78□□□□□ -1.64
MBD4O95243 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.78□□□□□ -1.64
MBD4O95243 AC013410.2-201ENST00000422627 201 ntBASIC4.78□□□□□ -1.64
MBD4O95243 DPRXP1-201ENST00000426312 460 ntBASIC4.78□□□□□ -1.64
MBD4O95243 MTCO1P3-201ENST00000429327 192 ntBASIC4.78□□□□□ -1.64
MBD4O95243 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.78□□□□□ -1.64
MBD4O95243 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.78□□□□□ -1.64
MBD4O95243 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.78□□□□□ -1.64
MBD4O95243 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.78□□□□□ -1.64
MBD4O95243 FABP3P2-201ENST00000453169 399 ntBASIC4.78□□□□□ -1.64
MBD4O95243 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.78□□□□□ -1.64
MBD4O95243 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.78□□□□□ -1.64
MBD4O95243 VPS26AP1-201ENST00000483197 979 ntBASIC4.78□□□□□ -1.64
MBD4O95243 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MBD4O95243 RNA5SP179-201ENST00000517284 121 ntBASIC4.78□□□□□ -1.64
MBD4O95243 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MBD4O95243 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.78□□□□□ -1.64
MBD4O95243 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
MBD4O95243 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.78□□□□□ -1.64
MBD4O95243 AC091516.1-201ENST00000549191 703 ntBASIC4.78□□□□□ -1.64
MBD4O95243 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.78□□□□□ -1.64
MBD4O95243 AC022968.1-201ENST00000567372 442 ntBASIC4.78□□□□□ -1.64
MBD4O95243 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.78□□□□□ -1.64
MBD4O95243 MIR5708-201ENST00000579723 85 ntBASIC4.78□□□□□ -1.64
MBD4O95243 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.78□□□□□ -1.64
MBD4O95243 AC104662.1-201ENST00000604448 511 ntBASIC4.78□□□□□ -1.64
MBD4O95243 AC091167.4-201ENST00000605079 184 ntBASIC4.78□□□□□ -1.64
MBD4O95243 RNA5SP108-201ENST00000605921 117 ntBASIC4.78□□□□□ -1.64
MBD4O95243 PART1_2.1-201ENST00000612397 250 ntBASIC4.78□□□□□ -1.64
MBD4O95243 AC068722.2-201ENST00000618734 544 ntBASIC4.78□□□□□ -1.64
MBD4O95243 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.78□□□□□ -1.64
MBD4O95243 ZNF663P-202ENST00000641770 1131 ntBASIC4.78□□□□□ -1.64
MBD4O95243 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
MBD4O95243 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.78□□□□□ -1.64
MBD4O95243 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
MBD4O95243 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
MBD4O95243 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.77□□□□□ -1.65
MBD4O95243 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
MBD4O95243 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
MBD4O95243 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
MBD4O95243 AC016588.2-201ENST00000632484 3021 ntBASIC4.77□□□□□ -1.65
MBD4O95243 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
MBD4O95243 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
MBD4O95243 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
MBD4O95243 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.77□□□□□ -1.65
MBD4O95243 RNU1-108P-201ENST00000362556 161 ntBASIC4.77□□□□□ -1.65
MBD4O95243 RNU6-707P-201ENST00000364647 95 ntBASIC4.77□□□□□ -1.65
MBD4O95243 MIR217-201ENST00000384817 110 ntBASIC4.77□□□□□ -1.65
MBD4O95243 MIR649-201ENST00000384843 97 ntBASIC4.77□□□□□ -1.65
MBD4O95243 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.77□□□□□ -1.65
MBD4O95243 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.77□□□□□ -1.65
MBD4O95243 RPF2P1-201ENST00000424137 906 ntBASIC4.77□□□□□ -1.65
MBD4O95243 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.77□□□□□ -1.65
MBD4O95243 Z93242.1-201ENST00000427102 353 ntBASIC4.77□□□□□ -1.65
MBD4O95243 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.77□□□□□ -1.65
MBD4O95243 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.77□□□□□ -1.65
MBD4O95243 AC092393.1-201ENST00000439625 742 ntBASIC4.77□□□□□ -1.65
MBD4O95243 HMGB1P16-201ENST00000447155 540 ntBASIC4.77□□□□□ -1.65
MBD4O95243 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.77□□□□□ -1.65
MBD4O95243 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.77□□□□□ -1.65
MBD4O95243 SNORD108-201ENST00000459332 71 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms