Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXA3O43365 AC006539.1-201ENST00000481419 501 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 ATP5LP5-201ENST00000483050 299 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXA3O43365 RPL39P36-201ENST00000490784 156 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXA3O43365 SEPT14P4-201ENST00000513445 186 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 RNA5SP92-201ENST00000516437 110 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXA3O43365 AC136777.2-201ENST00000522979 358 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 FO082796.1-201ENST00000523795 183 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 AC022832.1-201ENST00000530718 645 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 OR10G5P-201ENST00000532733 358 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 ARL2BPP2-201ENST00000550907 489 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 AL109766.1-201ENST00000555080 552 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXA3O43365 RN7SL802P-201ENST00000577858 299 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXA3O43365 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXA3O43365 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXA3O43365 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.54□□□□□ -1.68
HOXA3O43365 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXA3O43365 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXA3O43365 AC025449.1-201ENST00000603896 529 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 RMST_3.1-201ENST00000611651 109 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 AC116447.1-201ENST00000613153 453 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 AC006504.8-201ENST00000621046 635 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 AC018445.2-201ENST00000622987 260 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 AP002505.2-201ENST00000623585 696 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXA3O43365 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXA3O43365 CKAP2P1-201ENST00000555477 2049 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXA3O43365 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXA3O43365 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXA3O43365 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXA3O43365 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HOXA3O43365 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXA3O43365 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXA3O43365 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HOXA3O43365 AC093775.1-201ENST00000624154 1868 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.54□□□□□ -1.68
HOXA3O43365 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXA3O43365 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA3O43365 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA3O43365 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA3O43365 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA3O43365 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA3O43365 AC020633.1-201ENST00000468439 2247 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 AC109780.1-201ENST00000451768 1344 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 AL592148.3-201ENST00000608771 2646 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 AP005432.1-201ENST00000580891 3485 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXA3O43365 AP000756.2-201ENST00000624168 2567 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA3O43365 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA3O43365 RNA5SP453-201ENST00000362503 119 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 RNU6-451P-201ENST00000362921 107 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 RNA5SP234-201ENST00000363916 119 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 RNU6-1207P-201ENST00000384343 107 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 SNORA70-201ENST00000384436 135 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 SSXP10-201ENST00000402595 565 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 RPL31P52-201ENST00000407532 367 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 DPPA2P3-201ENST00000411853 655 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 OR9R1P-201ENST00000412200 877 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXA3O43365 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXA3O43365 SDCBPP3-201ENST00000419629 891 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA3O43365 EIF1P3-201ENST00000423841 334 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 AC007283.2-201ENST00000424739 197 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 AC092651.1-201ENST00000426110 312 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 AC006548.1-201ENST00000427470 102 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 PSMA6P3-201ENST00000428242 164 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 AL136231.1-201ENST00000429407 730 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXA3O43365 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXA3O43365 AL606489.2-201ENST00000433886 234 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXA3O43365 AC096775.1-201ENST00000437724 448 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 CYCSP12-201ENST00000437729 300 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 AC019185.1-201ENST00000442718 389 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXA3O43365 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HOXA3O43365 AL596266.1-201ENST00000448132 400 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 AL445687.2-201ENST00000458156 728 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 AP001992.1-205ENST00000462248 379 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXA3O43365 RPL32P9-201ENST00000487963 407 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 DUTP1-201ENST00000493631 470 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 AC006499.3-201ENST00000506077 748 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 HIGD1AP14-201ENST00000507617 282 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 RNU6-835P-201ENST00000516974 104 ntBASIC4.53□□□□□ -1.68
HOXA3O43365 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXA3O43365 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXA3O43365 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXA3O43365 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXA3O43365 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms