Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL592494.2-201ENST00000425455 1548 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
UPK1AO00322 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.21□□□□□ -1.9
UPK1AO00322 HMGB3P23-201ENST00000414981 585 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.21□□□□□ -1.9
UPK1AO00322 AL031736.2-201ENST00000426573 787 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 AL035458.1-201ENST00000433096 585 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 AC073063.1-201ENST00000434352 607 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 ELOCP11-201ENST00000436690 332 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 AC122718.1-201ENST00000439448 744 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.21□□□□□ -1.9
UPK1AO00322 ELOCP16-201ENST00000444494 332 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.21□□□□□ -1.9
UPK1AO00322 FAM133DP-201ENST00000464802 691 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 PLGLA-201ENST00000465668 449 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 RPL23AP44-201ENST00000482216 473 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 AC107398.1-201ENST00000486904 505 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.21□□□□□ -1.9
UPK1AO00322 AC002456.2-201ENST00000509356 380 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 PHBP14-201ENST00000512887 367 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 HMGN1P15-201ENST00000513870 295 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 RNU1-143P-201ENST00000516296 146 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.21□□□□□ -1.9
UPK1AO00322 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.21□□□□□ -1.9
UPK1AO00322 AC026403.1-201ENST00000518938 295 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.21□□□□□ -1.9
UPK1AO00322 MED28P5-201ENST00000528254 438 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.21□□□□□ -1.9
UPK1AO00322 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.21□□□□□ -1.9
UPK1AO00322 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.21□□□□□ -1.9
UPK1AO00322 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.21□□□□□ -1.9
UPK1AO00322 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.21□□□□□ -1.9
UPK1AO00322 AP003117.1-201ENST00000602771 554 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 AL365400.2-201ENST00000605604 902 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 AC110792.4-201ENST00000609843 298 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 U1.23-201ENST00000610293 146 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 RNU1-68P-201ENST00000615382 146 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 AP004607.9-201ENST00000618202 316 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 U1.39-201ENST00000621562 146 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 AC073476.4-201ENST00000628409 72 ntBASIC3.21□□□□□ -1.9
UPK1AO00322 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.21□□□□□ -1.9
UPK1AO00322 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
UPK1AO00322 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.2□□□□□ -1.9
UPK1AO00322 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.2□□□□□ -1.9
UPK1AO00322 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UPK1AO00322 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.2□□□□□ -1.9
UPK1AO00322 AL139811.1-201ENST00000424779 2299 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 RNA5SP383-201ENST00000362934 120 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.2□□□□□ -1.9
UPK1AO00322 SNORD17-201ENST00000390930 237 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 AL583834.1-201ENST00000406943 343 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.2□□□□□ -1.9
UPK1AO00322 LINC01881-201ENST00000416103 412 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.2□□□□□ -1.9
UPK1AO00322 AL356968.1-201ENST00000416622 474 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.2□□□□□ -1.9
UPK1AO00322 USP9YP31-201ENST00000431405 881 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 RPL21P23-201ENST00000446654 460 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 AC097262.1-201ENST00000452559 548 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 AC025518.1-201ENST00000479856 347 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 SUMO1P1-201ENST00000497904 306 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 OR5H3P-201ENST00000502817 919 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.2□□□□□ -1.9
UPK1AO00322 SAP18P1-201ENST00000512058 390 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 RNU6-551P-201ENST00000516661 103 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 AC107934.2-201ENST00000518653 310 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 OR4A2P-201ENST00000527276 913 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.2□□□□□ -1.9
UPK1AO00322 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.2□□□□□ -1.9
UPK1AO00322 AL845331.3-202ENST00000562856 261 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 AC034105.4-201ENST00000568304 277 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.2□□□□□ -1.9
UPK1AO00322 AP001542.1-201ENST00000591314 200 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.2□□□□□ -1.9
UPK1AO00322 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.2□□□□□ -1.9
UPK1AO00322 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UPK1AO00322 AL161637.1-201ENST00000622380 412 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 AC243312.2-201ENST00000623340 601 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UPK1AO00322 ZNF826P-207ENST00000622273 1910 ntBASIC3.2□□□□□ -1.9
UPK1AO00322 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
UPK1AO00322 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
UPK1AO00322 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.2□□□□□ -1.9
UPK1AO00322 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.2□□□□□ -1.9
UPK1AO00322 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UPK1AO00322 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UPK1AO00322 RPL7P26-201ENST00000333817 754 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 PTMAP5-201ENST00000393073 333 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.19□□□□□ -1.9
UPK1AO00322 AL590290.1-201ENST00000405336 380 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 RN7SKP111-201ENST00000410349 271 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 Z99755.1-201ENST00000414048 380 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.19□□□□□ -1.9
UPK1AO00322 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK1AO00322 AL049610.1-201ENST00000423374 372 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.19□□□□□ -1.9
UPK1AO00322 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK1AO00322 HMGB3P11-201ENST00000440127 604 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms