Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SHISA3A0PJX4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.13□□□□□ -1.59
SHISA3A0PJX4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.13□□□□□ -1.59
SHISA3A0PJX4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 THAP12P4-201ENST00000528321 2266 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 RN7SKP44-201ENST00000363602 316 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 RNU6-522P-201ENST00000364497 107 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 RNA5SP85-201ENST00000365378 119 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 SNORA70.6-201ENST00000383934 134 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 SNORD116-29-201ENST00000384516 83 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 RNU6-903P-201ENST00000391270 109 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AL583835.1-201ENST00000399570 407 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AL606923.1-201ENST00000406616 190 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 FTH1P1-201ENST00000437933 532 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AC092013.1-201ENST00000438795 332 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 RPS18P1-201ENST00000447840 458 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 KF459542.1-201ENST00000450908 553 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 RN7SL393P-201ENST00000463588 296 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 HMGB3P15-201ENST00000507326 574 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 RNA5SP92-201ENST00000516437 110 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 NARSP2-201ENST00000518524 679 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AP005435.4-201ENST00000529514 284 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 SULT1C2P2-201ENST00000562517 294 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AC024267.2-201ENST00000582737 417 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AC008737.2-201ENST00000599446 118 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 CYP2C61P-201ENST00000604072 290 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AL121992.2-201ENST00000606262 256 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AC103710.2-201ENST00000609912 942 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AL158196.1-201ENST00000616786 434 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 uc_338.11-201ENST00000619132 160 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AL078596.1-201ENST00000624856 447 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 NXPH1-205ENST00000602349 1953 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 DHX40P1-201ENST00000588725 1412 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 MTCO1P7-201ENST00000419523 1542 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AP001350.1-201ENST00000601906 1524 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
SHISA3A0PJX4 SAGE4P-201ENST00000442271 3381 ntBASIC5.12□□□□□ -1.59
SHISA3A0PJX4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AL138713.1-201ENST00000624026 2130 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 OR5P1P-201ENST00000299512 925 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 Y_RNA.301-201ENST00000364990 103 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 RN7SKP81-201ENST00000365603 331 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 Y_RNA.395-201ENST00000383945 109 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 Y_RNA.445-201ENST00000384168 102 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 RNU1-136P-201ENST00000384181 164 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 MIR19A-201ENST00000384878 82 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 RNY4P36-201ENST00000391116 96 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 RPL11P3-201ENST00000395256 523 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 GPS2P1-201ENST00000411761 986 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 RPSAP35-201ENST00000413753 818 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 OR6C66P-201ENST00000414917 930 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AL358176.3-201ENST00000420757 454 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 AC099677.3-201ENST00000427081 395 ntBASIC5.11□□□□□ -1.59
SHISA3A0PJX4 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.11□□□□□ -1.59
SHISA3A0PJX4 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms