Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AL732292.1-201ENST00000426692 226 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC083863.1-201ENST00000438811 231 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 MTCYBP42-201ENST00000444653 1130 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 RPL38P1-201ENST00000460914 211 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 RPS3AP41-201ENST00000462701 778 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 RPL9P32-201ENST00000464118 620 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 RPL23AP12-201ENST00000467573 473 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC020898.1-201ENST00000474167 787 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 RN7SL691P-201ENST00000494487 301 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC005912.1-201ENST00000495392 255 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AL035404.1-201ENST00000497982 568 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 MTCYBP35-201ENST00000503630 1137 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 snoZ278.1-201ENST00000517059 112 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC008802.1-201ENST00000519121 791 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 SUMO2P20-201ENST00000520803 283 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC139103.1-201ENST00000534696 1030 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 CR383656.6-201ENST00000550518 394 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC023813.2-201ENST00000564321 469 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 MIR4436B2-201ENST00000581415 91 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 MIR4436B1-201ENST00000583272 91 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AL390816.3-201ENST00000604527 1066 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC010975.3-201ENST00000618727 978 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AL158163.2-201ENST00000619110 700 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 VN1R7P-201ENST00000619242 903 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC013470.4-201ENST00000619978 986 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC017104.5-201ENST00000637647 639 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 PWAR6-201ENST00000552334 4618 ntBASIC3.8□□□□□ -1.8
NDE1Q9NXR1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
NDE1Q9NXR1 AC138393.1-206ENST00000540997 1886 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 RNU4-68P-201ENST00000364314 141 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 RNA5SP87-201ENST00000384155 118 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AF228730.1-201ENST00000397972 663 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 MTCO1P56-201ENST00000401674 224 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 RPS12P23-201ENST00000419579 400 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC027644.1-201ENST00000419595 298 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 XKRYP1-201ENST00000423438 492 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 XKRYP2-201ENST00000432915 492 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 VN1R54P-201ENST00000435210 1049 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 NANOGP2-201ENST00000435391 727 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AL031663.1-201ENST00000437445 219 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 RPL36AP15-201ENST00000444514 266 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 HMGN2P7-201ENST00000456186 273 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 SNORD11.1-201ENST00000459482 85 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC005410.1-202ENST00000460347 485 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC073522.1-201ENST00000483312 377 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC105233.1-201ENST00000498840 781 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.79□□□□□ -1.8
NDE1Q9NXR1 IGJP1-201ENST00000522682 475 ntBASIC3.79□□□□□ -1.8
NDE1Q9NXR1 MTCO3P15-201ENST00000526563 574 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms